Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car05g01229 ATGAAAAAACAAGGAGGCCCCAACTTGCATCAATCTAACCAAAGAAAAAAGAAAGTTGGTCACAAAAGTGGTAGTGCAGGCAAGGACAATGGAACAAATAGGAGTAATACTAAGAATGACCATACTGCCCTTACATATTTCAAGTCTGTTGTCAAGGTATGTGGAAGCCTTTTTACATTGTTTCTTCCTGGGAATACAAAAACAACCTCAGAAGCTGCTGAAAATAATTCCACAAGGAACAAAGTTAGAGGAGTATCATCTTCAACAGATGTATCATCTGATAGTTCTAAGAGTTCATCAAAATGGAAATCTTCTCAATCCTCAGCAGCATCATCTAGCACTTCAAGTATTCAGCTTGGAATGGGAAACTTTACCTTTGAGGAAATTTACAAGGCAACAGCAAAATTCTCTGTAGATAATAAGATTGGTGAAGGAGGGTTTGGAATAGTATACAAGGGAAAGCTTTCTGATGGATCCCTTGTGGCTGTCAAGTGTGCCAGTAAGGATGTACATAAGAAGCACTTGGCTGAGTTCAAGAATGAGATAAACACCTTGTCAAAAATTGAGCATTTGAATCTTGTGAGGTGGTATGGATATTTGGAGCATGGAGATGAAAAGATTATTGTTATTGAATATGTTAATAATGGAACTCTTAGGGAACATCTAGATGGTGTAAGGGGAAATGGACTAGAAATTGGTGAACGTCTAGACATAGCAATTGATGTAGCTCATGCAATTACATATCTTCACATGTACACAGATCATCCAATTATTCACAGAGACATAAAAGCATCAAACATCTTAATAACTGACAAATTGAGGGCCAAAGTGTCAGACTTTGGTTTTGCTAGGTTGGGATCAGAAGACCCTAATGCAACTCATATCTCAACTCAAGTTAAAGGAACAGCTGGTTACTTGGATCCTGATTACATGAGAACAAGACACCTCTCTGAAAAGAGTGATGTTTATTCCTTTGGTGTTTTACTTGTTGAAATGATGACAGGAAGACATCCAATTGAACCAAAGAGACACCTCAGTGAGAGAGTTACAATTAAATGGGCAATGCAGTTGTTGAAACAAGGAGAAGCTGTGATTGCAATGGATCCAAGGCTTCAGAGAAGTTCAGCCTCAAACAAAGCTGTACAAAAGGTTCTCAATCTTGCTTTCCAATGCCTTGCACCGGTGAAACGATTGCGGCCATCGATGAAGAATTGTGCAGAGGTTTTATGGGAAATTAGAAAAGATTATAGAGACAGAGTCTTTTCTCATCCTCCTCCTGTTTCTCACCATTCAGCAGATTTTCCTCAGAGAGATTCTAGGAAGAATAGACATAAGTCATATGGTATAAATAATAACAATAAATTTGTCTCAGCATAA 1377 0.3805 MKKQGGPNLHQSNQRKKKVGHKSGSAGKDNGTNRSNTKNDHTALTYFKSVVKVCGSLFTLFLPGNTKTTSEAAENNSTRNKVRGVSSSTDVSSDSSKSSSKWKSSQSSAASSSTSSIQLGMGNFTFEEIYKATAKFSVDNKIGEGGFGIVYKGKLSDGSLVAVKCASKDVHKKHLAEFKNEINTLSKIEHLNLVRWYGYLEHGDEKIIVIEYVNNGTLREHLDGVRGNGLEIGERLDIAIDVAHAITYLHMYTDHPIIHRDIKASNILITDKLRAKVSDFGFARLGSEDPNATHISTQVKGTAGYLDPDYMRTRHLSEKSDVYSFGVLLVEMMTGRHPIEPKRHLSERVTIKWAMQLLKQGEAVIAMDPRLQRSSASNKAVQKVLNLAFQCLAPVKRLRPSMKNCAEVLWEIRKDYRDRVFSHPPPVSHHSADFPQRDSRKNRHKSYGINNNNKFVSA 458
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car05g01229 458 SMART serkin_6 136 409 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car05g01229 458 ProSitePatterns Protein kinases ATP-binding region signature. 142 164 IPR017441 GO:0005524
Car05g01229 458 MobiDBLite consensus disorder prediction 68 107 - -
Car05g01229 458 PANTHER OS01G0253100 PROTEIN 1 449 IPR045271 GO:0004714|GO:0006468
Car05g01229 458 ProSitePatterns Serine/Threonine protein kinases active-site signature. 257 269 IPR008271 GO:0004672|GO:0006468
Car05g01229 458 SUPERFAMILY Protein kinase-like (PK-like) 111 412 IPR011009 -
Car05g01229 458 Pfam Protein tyrosine and serine/threonine kinase 138 409 IPR001245 GO:0004672|GO:0006468
Car05g01229 458 Coils Coil 458 458 - -
Car05g01229 458 PANTHER OS02G0821400 PROTEIN 1 449 - -
Car05g01229 458 ProSiteProfiles Protein kinase domain profile. 136 411 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car05g01229 458 Gene3D Phosphorylase Kinase; domain 1 95 212 - -
Car05g01229 458 MobiDBLite consensus disorder prediction 421 458 - -
Car05g01229 458 Gene3D Transferase(Phosphotransferase) domain 1 213 423 - -
Car05g01229 458 MobiDBLite consensus disorder prediction 1 39 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car05g01229 Car-Chr5 55518636 55522246 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car05g01229 32 417 Receptor kinase-like Gene Family AT3G58690 35.459 3.31e-67 218
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-IV Car05g01229 PK_Tyr_Ser-Thr 1.6e-49 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car05g01229 - - gmx:100815871 659.448
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car05g01229 05 55518636 55522246 Car05g01229 05 55518636 55522246 ECH