Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car05g01197 ATGACGGCCACACTCAGCCTCACCGTTCTTCCCTCCGTCAGGCCATTTCGCTTCGCGGACGACTGCTCCACCTCCGCCAGGTTTCATCGTAAGCCGAGTTCCGTTTGCGCAAATCGCCGCCGTGTTTCAGTCAGAGCCGTTGCGGCGGTAGTCGAGACGCGGCGGCCGGCGACGAGTCTCTACGAGGTACTACGACTGGAACCAGGCGCATCTATGACGGAAATTAAATCAGCTTACCGGAGTCTAGCGAAGGTTTACCATCCCGATACGGCGGCGCGTCGGTTGCCGGAGTGTGACGACGGAGACTTCATTGAGATACGCAACGCTTACAAGACGTTGTCTGATCCATCGGCGAGAGCTATTTACGATCTGTCACTGATGGCGGTGCACGGCGGAAGGAACCGGCGGTTTACAGCGCCGGCGACGCAGAAACGGTATTCGGGATATTATACGAGCAGGAGATGGGAAACGGACCAATGCTGGTAG 486 0.5761 MTATLSLTVLPSVRPFRFADDCSTSARFHRKPSSVCANRRRVSVRAVAAVVETRRPATSLYEVLRLEPGASMTEIKSAYRSLAKVYHPDTAARRLPECDDGDFIEIRNAYKTLSDPSARAIYDLSLMAVHGGRNRRFTAPATQKRYSGYYTSRRWETDQCW 161
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car05g01197 161 SMART dnaj_3 58 118 IPR001623 -
Car05g01197 161 Pfam DnaJ domain 60 123 IPR001623 -
Car05g01197 161 SUPERFAMILY Chaperone J-domain 56 132 IPR036869 -
Car05g01197 161 CDD DnaJ 61 115 IPR001623 -
Car05g01197 161 ProSiteProfiles dnaJ domain profile. 59 126 IPR001623 -
Car05g01197 161 PANTHER CHAPERONE PROTEIN DNAJ 11, CHLOROPLASTIC-LIKE 1 161 - -
Car05g01197 161 Gene3D DnaJ domain 47 147 IPR036869 -
Car05g01197 161 PANTHER CHAPERONE PROTEIN DNAJ 11, CHLOROPLASTIC-LIKE 1 161 - -
Car05g01197 161 PRINTS DnaJ domain signature 61 79 IPR001623 -
Car05g01197 161 PRINTS DnaJ domain signature 79 94 IPR001623 -
Car05g01197 161 PRINTS DnaJ domain signature 98 118 IPR001623 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car05g01197 Car-Chr5 54900498 54901334 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car05g01197 61 123 C2H2 Transcription Factor Family AT1G74250 45.455 5.15e-07 46.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car05g01197 - - gmx:100798752 167.548