Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car05g01196 ATGACGGCAACACTCAGCCTCACCGTTCTTCCCTCCGTCAGGCCATTTCGCTTCGCCGACGACTGCTCCACTTCCGTCAGGTTTCACCGTAAGCTGAGTTCTGTTTGCGCAAATCGGCGCCGTGTTTCAATCAGAGCCGTTGCGGCGGTAGTCGATACGCGGCGGCCGGCGACGAGTCTCTACGAGGTACTACGACTGAAACCAGGCGCATCTATGACGGAAATTAAATCAGCGTACCGGAGTCTAGCGAAGGTTTACCATCCCGATACGGCGGCGCGGCGGTTGCCGGAGTGTGACGACGGAGACTTCATTGAGATACGCAACGCTTACGAGACTTTGTCTGATCCATCGGCGAGAGCGATTTACGATATGTCACTGATGGCGGCGCACGGCGGAAGGAACCGTCGGTTTACAGCGCCGGCGACGCAGAAACGGTATTCGGGATATTATACGAGCAGGAGATGGGAAACGGACCAATGCTGGTAG 486 0.5658 MTATLSLTVLPSVRPFRFADDCSTSVRFHRKLSSVCANRRRVSIRAVAAVVDTRRPATSLYEVLRLKPGASMTEIKSAYRSLAKVYHPDTAARRLPECDDGDFIEIRNAYETLSDPSARAIYDMSLMAAHGGRNRRFTAPATQKRYSGYYTSRRWETDQCW 161
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car05g01196 161 ProSiteProfiles dnaJ domain profile. 59 126 IPR001623 -
Car05g01196 161 PANTHER CHAPERONE PROTEIN DNAJ 11, CHLOROPLASTIC-LIKE 1 161 - -
Car05g01196 161 CDD DnaJ 61 115 IPR001623 -
Car05g01196 161 PRINTS DnaJ domain signature 61 79 IPR001623 -
Car05g01196 161 PRINTS DnaJ domain signature 79 94 IPR001623 -
Car05g01196 161 PRINTS DnaJ domain signature 98 118 IPR001623 -
Car05g01196 161 Gene3D DnaJ domain 48 148 IPR036869 -
Car05g01196 161 SUPERFAMILY Chaperone J-domain 56 132 IPR036869 -
Car05g01196 161 Pfam DnaJ domain 60 123 IPR001623 -
Car05g01196 161 SMART dnaj_3 58 118 IPR001623 -
Car05g01196 161 PANTHER CHAPERONE PROTEIN DNAJ 11, CHLOROPLASTIC-LIKE 1 161 - -
Car05g01196 161 ProSitePatterns Nt-dnaJ domain signature. 103 122 IPR018253 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car05g01196 Car-Chr5 54863202 54864096 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car05g01196 61 123 C2H2 Transcription Factor Family AT1G74250 46.970 1.37e-07 48.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car05g01196 - - gmx:100778445 172.555
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car05g01196 05 54863202 54864096 Car05g01196 05 54863202 54864096 ECH