Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car05g01194 ATGAAGATCACTGTCATGACTTCCGATGAACAAATTCTCACCTTGGATGTGGATCCTAACGAATCTGTGGAAAACGTTAAGGCATTACTTGAGGTTGAGACAAGTGTGCCTCTTCAGCAACAACAGATTCTGTTCAATGGGAATGAGGTGAGAAATTCTCAGAAGTTGAGTGCCCTTGGTGTTAAGGATGATGATTTGCTAATGATGACGGTCTCTGGCGCTGGTGCTGCTCCTGCTTCTAGTGGATTATCATCTACCAATGATTTGAGCTTCAATACTGATGGATCTGCTGTAAACCCTGGTGCTTTTCAGCAGCACTTTAGACGCGATTCTAATTTGATGGGTCAGCTCTTTCAGAATGACCCGGAGTTGGCACAAGCTATTCTGGGGAATGATCTCAATAAAATCCAAGAAATTTTACGTTTGCGTCATCGCCAAAGAGATGAATTACGGCGTCAGAAAGAAGAAGAGATGGCTCTTCTTTTTGCCGATCCTTTTGATGTTGAAGCACAAAAGAAGATTGAAGCTGCCATCCGCCAGAAAGGAATTGACGAAAATTGGGAAGCTGCACTTGAACATAATCCGGAAGCTTTTGCTAGAGTGGTCATGTTGTATGTTGACATGGAGGTTAACGGCGTACCACTGAAGGCATTTGTTGATAGTGGAGCCCAGTCGACCATTATATCAAAAAGCTGCGCTGAGCGTTTAGGATTGTTGAGACTCTTAGATCAGCGTTATAGAGGAGTGGCTCATGGAGTTGGCCAATCGGAAATATTGGGTCGGATACATGTAGCTCCAATCAAGATTGGGAATATATTTTACCCTTGTTCATTCTTAGTTCTGGATTCTCCCAATATGGAGTTTCTCTTTGGTCTGGATATGCTCAGAAAGCATCAGTGTATAATTGATTTAAAAGAAAATGTTTTGCGAGTCGGTGGTGGAGAAGTTTCTGTGCCATTTTTGCAAGAGAAAGACATACCATCTCAGTTTTTAGATGAGCAGAAGTATTCTAAGGAAGCTTCAAGCTCAGGAAACCCTCTCCCAGTTACATCAGGTGGCAATAATCCATCACAAGGTGGCACATCTTCTGGTGGAGCTTCTGGTGACAGGTCTAAGGACTCTGCATTTGAAGCCAAAGTTGCAAAGCTTGTTGAGCTAGGATTTGGAAGAGAAGCAGTTATACAAGCTCTTAAATTATTCAATGGCAATGAGGAACAAGCAGCTGGGTTTCTTTTTGGGGGCTGA 1245 0.4289 MKITVMTSDEQILTLDVDPNESVENVKALLEVETSVPLQQQQILFNGNEVRNSQKLSALGVKDDDLLMMTVSGAGAAPASSGLSSTNDLSFNTDGSAVNPGAFQQHFRRDSNLMGQLFQNDPELAQAILGNDLNKIQEILRLRHRQRDELRRQKEEEMALLFADPFDVEAQKKIEAAIRQKGIDENWEAALEHNPEAFARVVMLYVDMEVNGVPLKAFVDSGAQSTIISKSCAERLGLLRLLDQRYRGVAHGVGQSEILGRIHVAPIKIGNIFYPCSFLVLDSPNMEFLFGLDMLRKHQCIIDLKENVLRVGGGEVSVPFLQEKDIPSQFLDEQKYSKEASSSGNPLPVTSGGNNPSQGGTSSGGASGDRSKDSAFEAKVAKLVELGFGREAVIQALKLFNGNEEQAAGFLFGG 414
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car05g01194 414 PANTHER ASPARTYL PROTEASE DDI-RELATED 1 412 - -
Car05g01194 414 CDD Ubl_Ddi1_like 1 71 IPR033882 -
Car05g01194 414 PANTHER AT13091P 1 412 - -
Car05g01194 414 MobiDBLite consensus disorder prediction 335 371 - -
Car05g01194 414 CDD RP_DDI 188 311 IPR019103 GO:0004190|GO:0006508
Car05g01194 414 SUPERFAMILY Acid proteases 188 304 IPR021109 -
Car05g01194 414 Gene3D Acid Proteases 182 328 IPR021109 -
Car05g01194 414 ProSiteProfiles Ubiquitin-associated domain (UBA) profile. 371 414 IPR015940 -
Car05g01194 414 MobiDBLite consensus disorder prediction 335 369 - -
Car05g01194 414 Gene3D - 376 412 - -
Car05g01194 414 CDD UBA_scDdi1_like 377 412 - -
Car05g01194 414 SUPERFAMILY UBA-like 365 414 IPR009060 GO:0005515
Car05g01194 414 Pfam Aspartyl protease 181 303 IPR019103 GO:0004190|GO:0006508
Car05g01194 414 Gene3D - 1 85 - -
Car05g01194 414 SMART uba_6 376 413 IPR015940 -
Car05g01194 414 Pfam UBA/TS-N domain 377 410 IPR015940 -
Car05g01194 414 Coils Coil 136 156 - -
Car05g01194 414 ProSiteProfiles Ubiquitin domain profile. 1 76 IPR000626 GO:0005515
Car05g01194 414 SUPERFAMILY Ubiquitin-like 1 84 IPR029071 -
Car05g01194 414 SMART ubq_7 1 72 IPR000626 GO:0005515
Car05g01194 414 Pfam Ubiquitin family 3 71 IPR000626 GO:0005515
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car05g01194 1 77 Cytoplasmic Ribosomal Protein Gene Family AT1G23410 25.974 7.91e-06 43.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car05g01194 K11885 - gmx:100779464 701.434
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car05g01194 05 54817024 54823338 Car05g01194 05 54817024 54823338 ECH