Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car05g01193 ATGCGAATCAAACTCTTACTATTATACATCAATTCTTGCAAAGTAAAGTTTGAGCTAGTGAGCAAATCTTCTCATGCCATCAAAAAGTCTTATATTGTGTACTTAGGATCACATTCTCATGGACCAAACCCTTCAGCAAGTGATTTAGAGTCTGCAACAAATTCCCATTACAATTTACTTGGTTCACACTTGGGAAGCCATGAGAAGGCTAAGGAAGCAATATTTTACTCATATAATAAACACATCAATGGTTTTTCTGCTGTACTTGAAGTAGAAGAAGCAGCAAATATTGCAAAACATCCAAATGTAGTGTCTGTGTTTGTGAACAAAGGGCATGAATTACAAACCACAAGATCATGGGAATTTCTTGGTCTAGAGAATAATAATGGAGTGGTTCTTAAAGACTCCATATGGGAGAAGGCAAGATATGGTGAAGGTACAATTATTGCTAACATTGATACAGTTGTTGCTTCTGGAGGAAATTCAGGACCAAAATTGGGAACTGTTACTAATGTGGCACCATGGTTGTTTAGTGTTGGGGCTAGCACAATAGATAGGAATTGCAAAATGCAATCAAACGAGGCATCATCTTCGATGGAAGTTGACGCTGTCCCATCTGAAGAAAAAGTTTTGCCTCCAAAACCAAAGTTTGAGCCTCTTAAACCTCATGAGATGTCTAGTGGTCAGGTTCAGTTCCGCAAGGTATCAGTTCCACCACATCGTTATACACCTCTCAAGAAAGTTTGGATGGACATCTATACTCCTGTATATGAGCAGATGAAAATTGACCTCCGAATGAATTTGAAGGCTCGAAAAGTTGAGCTGAAGACAAGGCATGATACACCTGACATCAGTAACCTGCAAAAATGTGCTGATTTTGTTCATGCTTTCATGTTGGGTTTTGATGTCATAGATGCTATTGCCCTTCTGCGTTTGGATGAGCTCTATGTCGAGTCCTTTGAAATCAAAGATGTTAAGACACTTCGAGGTGATCACTTGTCCCGTGCTATTGGAAGATTGTCCGGAAAAGGTGGTAAAACCAAGTTTGCAATTGAGAATGCATCCAAGACAAGAATTGTGATTGCTGACACCAAAATTCACATTCTGGGATCTTTTGCAAACATCAAGATTGCTAGGGATTCTCTTTGTTACCTAATTATGGGATCACCAGCAGGAAAGGTCTATTCCAAATTGAGAGCGGTTTCTGCTAGGCTGGCAGAGAGGTTTTGA 1230 0.3959 MRIKLLLLYINSCKVKFELVSKSSHAIKKSYIVYLGSHSHGPNPSASDLESATNSHYNLLGSHLGSHEKAKEAIFYSYNKHINGFSAVLEVEEAANIAKHPNVVSVFVNKGHELQTTRSWEFLGLENNNGVVLKDSIWEKARYGEGTIIANIDTVVASGGNSGPKLGTVTNVAPWLFSVGASTIDRNCKMQSNEASSSMEVDAVPSEEKVLPPKPKFEPLKPHEMSSGQVQFRKVSVPPHRYTPLKKVWMDIYTPVYEQMKIDLRMNLKARKVELKTRHDTPDISNLQKCADFVHAFMLGFDVIDAIALLRLDELYVESFEIKDVKTLRGDHLSRAIGRLSGKGGKTKFAIENASKTRIVIADTKIHILGSFANIKIARDSLCYLIMGSPAGKVYSKLRAVSARLAERF 409
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car05g01193 409 SMART kh_6 314 387 IPR004087 GO:0003676
Car05g01193 409 PANTHER RNA-BINDING PROTEIN PNO1 195 409 IPR039912 -
Car05g01193 409 Gene3D K Homology domain, type 1 313 409 IPR036612 GO:0003723
Car05g01193 409 CDD KH-I 334 380 - -
Car05g01193 409 SUPERFAMILY Subtilisin-like 17 153 IPR036852 GO:0004252|GO:0006508
Car05g01193 409 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 15 115 IPR037045 -
Car05g01193 409 MobiDBLite consensus disorder prediction 196 223 - -
Car05g01193 409 MobiDBLite consensus disorder prediction 207 221 - -
Car05g01193 409 Gene3D Peptidase S8/S53 domain 154 184 IPR036852 GO:0004252|GO:0006508
Car05g01193 409 Pfam Peptidase inhibitor I9 30 110 IPR010259 -
Car05g01193 409 SUPERFAMILY Eukaryotic type KH-domain (KH-domain type I) 314 408 IPR036612 GO:0003723
Car05g01193 409 PANTHER RIBONUCLEASE Y 195 409 - -
Car05g01193 409 SUPERFAMILY Subtilisin-like 154 206 IPR036852 GO:0004252|GO:0006508
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car05g01193 Car-Chr5 54796225 54814002 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car05g01193 149 186 Subtilisin-like Serine Gene Family AT5G59810 65.789 1.05e-08 55.5