Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car05g01192 ATGAGTGATTCGGTTTACAAAGTTGAAACAACACCACGTCTTGCTCAATGGAGAATCGAAAACTTGGCTTCTTGCACTTATCGCAAATCAGATCCTTTCAAGATTGGAAATTGGAATTGGTATTTGTCTGTGGAGAAACACAAGGTTGTGTTTGTTAAATTGTTTCCTGAAATATCCAATGTCACAAGGGACAATCCTCCAATTGCTTCTTTTATTATGCGTGTGGTTAGTTCTGCTGTTGGAGATCGCAAAGCTCTCACACATCCAGAGATCAAGGACAAAGTGATCAGGAGCAATGAGGATTTTGTTTGGTCAATTGAGGTTCCATTGTCTGGCAAATTCATTATTGATGTAGATTTCCTTGATTTGAAGATTGCAACACCAAACGGGGGAGAGCCTTGTTCCATATGGGCTGGTGAAGGATTTACTCAAGACAAATCAAATGCAAAAGCCCTAAGATCACTTGGTATGATGCTAGCAGAAGGAATTCACACAGACATCACCATCAACGCTTCGAATGGAAGTATAGGAGCTCATCGAGCTGTTCTTGCTGTCCGGTCGCCTGTTTTTTGCAGCATGTTCTCACATGATCTTAAAGAGAAGGAGTTGTCGACCATAAACATCACAGACATGTCAATCGAAACGTGTCAGGCGTTTCTCAATTATCTTTATGGGATCATAAAAAATGAAGAGTTTATGACACATAGGCTGGCCCTTCTGCACGCGGCTGACAAGTACGACATATCTGATTTGAGAGAGGCCATCCATGAGAGTCTGCTAGAAGATATCGATTCGAAAAATGTACTTGAAAGGCTTCAACATGCATCACTGTATCGGTTGACGAAACTAAAGATGAACTGTATCAAATATCTTGTTAAATTTGGTAAAATATTTGAAATTCGGGATGATTTCAGTACTTTTCTTCAAAATGCAGATAGGGATCTCATTGCTGAAGTCTTCCATGAAGTTCTTGGTGCTTGGAAAGGATTCTAA 993 0.4008 MSDSVYKVETTPRLAQWRIENLASCTYRKSDPFKIGNWNWYLSVEKHKVVFVKLFPEISNVTRDNPPIASFIMRVVSSAVGDRKALTHPEIKDKVIRSNEDFVWSIEVPLSGKFIIDVDFLDLKIATPNGGEPCSIWAGEGFTQDKSNAKALRSLGMMLAEGIHTDITINASNGSIGAHRAVLAVRSPVFCSMFSHDLKEKELSTINITDMSIETCQAFLNYLYGIIKNEEFMTHRLALLHAADKYDISDLREAIHESLLEDIDSKNVLERLQHASLYRLTKLKMNCIKYLVKFGKIFEIRDDFSTFLQNADRDLIAEVFHEVLGAWKGF 330
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car05g01192 330 PANTHER OS08G0495500 PROTEIN 1 330 - -
Car05g01192 330 CDD BTB_POZ_ZBTB_KLHL-like 164 246 - -
Car05g01192 330 SMART BTB_4 165 263 IPR000210 GO:0005515
Car05g01192 330 Gene3D Potassium Channel Kv1.1; Chain A 142 293 IPR011333 -
Car05g01192 330 ProSiteProfiles BTB domain profile. 165 224 IPR000210 GO:0005515
Car05g01192 330 PANTHER OS08G0495500 PROTEIN-RELATED 1 330 IPR044714 -
Car05g01192 330 SUPERFAMILY POZ domain 150 291 IPR011333 -
Car05g01192 330 Pfam BTB/POZ domain 159 261 IPR000210 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car05g01192 Car-Chr5 54790260 54795019 Dispersed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR TRAF Car05g01192 BTB 4e-20 CL0033
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car05g01192 K10523 - gmx:100790186 576.63
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car05g01192 05 54790260 54795019 Car05g01192 05 54790260 54795019 ECH
Car05g01192 05 54790260 54795019 Car02g01316 02 39193599 39200820 PCT