Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car05g01189 ATGGTCGTTGATGAGTGTGACTCCACAATGGGATGTGACGAAGATCATGATTACCAACCTCCTTGTCAGAACAACATTGTTGATGCTTCTAAAACATTAGGGAAAGCCTTAAATATGTCTCATGGTCAATGGGGTGGCATTGACATTACATGCGCAGTACTAATTTTCTTTGGAGTAACAACTTTAATAATCTTCTTAGCCATCAAACCAAGAAACCCTACATTTAACATCTTTAATGCAAACCTCAATGTTGTATACTTTGACTCGCCTCAATACTTCAATGGTGACTTCACTCTCCTTGCAAATTTCACCAATCCCAACACCAAAATTGATGTAAGTTTTGAGTCTTTGGACGTCGAGCTTTTCTTTTTAGATGTGATCATATCAGCACAATCAATTCAACCTTTCACACAACGAAGAAGGGAGAGTAGGTTGCAATCATTACACTTCATATCAAGTTTGGTTTTGTTGCCTAAGGATCTTGGTGTCAAACTTCAAAAGCAAATGCAAAGTAACAAGATTAACTATAATGCAAGAGGAACATTTGAAGTGAGATTAAACTTTGGACTTACTCATTTTTCTTACTTGTTTCATAGTAAATGTCAGATGGAGTTTACTAGTCCACCAAGTGGTGTCTTAGTAGCAAGAAAGTGCATAACAAAGAGATGA 669 0.3677 MVVDECDSTMGCDEDHDYQPPCQNNIVDASKTLGKALNMSHGQWGGIDITCAVLIFFGVTTLIIFLAIKPRNPTFNIFNANLNVVYFDSPQYFNGDFTLLANFTNPNTKIDVSFESLDVELFFLDVIISAQSIQPFTQRRRESRLQSLHFISSLVLLPKDLGVKLQKQMQSNKINYNARGTFEVRLNFGLTHFSYLFHSKCQMEFTSPPSGVLVARKCITKR 222
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car05g01189 222 PANTHER LATE EMBRYOGENESIS ABUNDANT (LEA) HYDROXYPROLINE-RICH GLYCOPROTEIN FAMILY 50 222 - -
Car05g01189 222 PANTHER LATE EMBRYOGENESIS ABUNDANT (LEA) HYDROXYPROLINE-RICH GLYCOPROTEIN FAMILY PROTEIN 50 222 - -
Car05g01189 222 Pfam Late embryogenesis abundant protein 104 195 IPR004864 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car05g01189 Car-Chr5 54703321 54706704 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car05g01189 - - cam:101498409 435.261
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car05g01189 05 54703321 54706704 Car05g01189 05 54703321 54706704 ECH
Car05g01189 05 54703321 54706704 Car02g02169 02 51877368 51878280 PCT