Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car05g01187 ATGCCACATGAGGAGTCTCAAAACACATTTTTCATATCTCCTTCAAAGAGAGGATTGAAGGGTCTAGTATCTATGAACATCAAAGATGCTTCATGCACTTCCATAGAGGAGTGTTTCAATGATCATGATTTGGCTCACAGAAAAGCAGAAGAAGCAGcttcaaggagatacgaagcatcagaatggctacgtcaaatggacaatgtggcatgttcattcttacctccaaaaccctcacaacaagatttctgcatttcacttcgcaacggtctcattctctgcaacgttctcaacaaagtgaatcctggcgctgttgtcaaagttgtggacaatcctgcacttgctgcttctgctactgtagaaggagccgcacattctgctattcagtattttgagaatatgagaaactttctttatgctgttaaggatatgcaactcttgacttttgaagcttctgatttggagaagGGTGGTTCATCAAATAAAGTTGTGGACTGCATTCTATGTTTGAAGGGATACTATGAATGGAAACTATCCGGTGGAGTTGGTGTGTGGAGGTATGGTGGAACTGTGAGGATAACTTCCTTCCCAAAGAGGTCTCCTTCTTCTTCCATAGTTGGCAGTGAAAGTGCTGATGATTCACTGGATGAGTCTGAGTCATCACAGTATGAACACCTGCTAGAATTTCTTCACCTATCTGAAGAGTTCTTGAATGAAGAAACCAAAACTGCCAATGCTCTTGCTTTCCTTTTTGATCACTTCGGACTCAAACTTCTTCAGGCTTACCTTAGAGAAACAGATGGGATTGATGATCTGCCTCTGAATACAATGGTAATTGATGCCTTACTCGGAAAGGTAGTCAAGGATTTCTCGTCTTTGCTTCTTTGTCAAGGCACTGAGCTTGGACTTTTCCTAAAGAAAATATTAAAAGGGGATATTGGTTGTCTCTCAAAGAGGGAGTTTGTGGAAGCTATATCACTATATCTTAATCAAAGAAGTAGTTTGGCATCACATGATTTCTCCAAATTCTGTGTTTGTGGTGGCAAGCGTGATAGTGTTCGACAAAATGTCAATTATTCTGCCAAATATGCTGAAGTAATAAACACTCAAGAGAAACAACTTCAGAGGATGAAATACTTATTTGATGATACAAAACTGGAAGTCAAAGAAATTCAATCAGAGTGGGGACAAGAATTGAGTAGGCTAGAGCATCATATCAAGAGCCTTGAAGtggcctcctcttcttaccacaaagttttagaagagaatcgttttctttacaaccaagtacaagacctcaaaggagccattagggtctactgtagagtgagacccttcttacagggacaatcaaatggacagtctacagtagactatattggagaaaatggagacatgatgattgtaaatcccctcaagcaaggaaaagatgcaagaagagtattttcattcaataaggtgtttggAACAAGTGTTACACAAGaacaaatttatgctgacactcaaccgttgatcaggtctgttttagatggttataatgtgtgcgtctttgcttatggacagaccggctcagggaaaacctacacaatgagtggtcctgatctgtcagctgaagatacatggggtgtaaactatagggctttgcgtgatttattttatataacaaaggaaagatcagattccataaaatatgaagttttcgtccagatgattgaaatatacaatgaacaagtgagagatttattagtcagtgatggctctaacagaagattagatatacgaaacacttcccagctgaatggcctcaatgtgcctgatgcatttttagttccggttacttgtactcgagatgttgtaaatttaatgagaatcggtcagaaaaaccgtgctgtaggggctactgctctaaatgagagaagcagtcgttctcatagtgttttgactgttcatgttcgaggcagggagttagtttctaactccattcttaggggttgtctccatcttgttgatttggctggtagcgagagagttgacaaatcagaggctgttggtgagagactaaaggaggcacaacatataaataggtcactctcagcacttggggatgttatttcagctttggcacagaaaagtgcacatatcccttatagaaatagcaagctcacacaagtgttacaagattctttaggagggcatgcaaaaacattgatgtttgttcatataaatcccgaacttaatgctattggggagacaattagcacactcaagtttgctgagagggttgcatccattgaacttggggctgctcaatctaataaagaaactggggaaattcgagaactgaaggaagagATATCAAGTCTGAAACTGACATTGGAGAGAAAGGAAACAGAGCTGGAGCAGTTGAAAGCTGGGAATGCTCGAAACAATACCGAGTCTCCGAAACCAAGAGCTGTTTCACCTTATCATTTGCCAAAATACGGCACCAGTGGAAACATGAAGCCTGAAACTAATCAACGAATCATGGACGATAGAAACTTAGAGGCTAGAAGTTGCTCTTCCGGTAAACAAAGAAGGTCAAGGTTTCCCTCAGCATTTATGGACAAGGAGTCCATACCGAAAATGTCCCTTCTCACTGAAGAAAAAATAGTGAGCTCAGTGAAAGGAAGATCACCATCACCTCCAGTCAGAAGATCAATATCTACTGATAGAGGGTCAGTCATTAAAAGCAAGGTAAAAAATGACACAGCAGATAACCAACCAGTATTAAAGCATCCATTTCCAGCTAGAGTACCGGATAGCAAATTCCTTGGCATGATGCCAATGGCTGCATCTCTTGAGAATAATGCAAGGTTGCATGTGAACTCACCAGAGCCAGTAAAGCATGAAGAAGAACAATTCAAGCAAGCACTTAGTGCCGTAAGACAAGGCGGTATTAAAAAAACCAAGGTTGAAAGTAAGGCTAAAGTCAAGCATCATCAACCGTCTCCCTTTAAGATTCAAAAGCCTGATTTGATCCCAACATTTACTTCTGGCATGGAGACACCTCCAAAGAGTGATCTCTCTGAGCCCGAAAGTGATCTTCGATTTGTTGAGTCTGCAGTTCATGGTGCTTTAAATCTCAATAAGATACGTCAGAACTTTCCAAGGAATTTTCAGAACCTTGAATCAAGAGGAATAGTGCAAGCAGGAGAGCCTTTATCAGCTAGCAAAGTTGAAAACAAACTTTTGAATGGTTCAGGTAGTAATTATAAAGAAGGAAATAATACATCAATGCCTGAATTTAGAAGGAGCCGATCTACCCCACGCGGAAAGTTTTTTGGTTTATCATGA 3333 0.2319 MPHEESQNTFFISPSKRGLKGLVSMNIKDASCTSIEECFNDHDLAHRKAEEAASRRYEASEWLRQMDNVACSFLPPKPSQQDFCISLRNGLILCNVLNKVNPGAVVKVVDNPALAASATVEGAAHSAIQYFENMRNFLYAVKDMQLLTFEASDLEKGGSSNKVVDCILCLKGYYEWKLSGGVGVWRYGGTVRITSFPKRSPSSSIVGSESADDSLDESESSQYEHLLEFLHLSEEFLNEETKTANALAFLFDHFGLKLLQAYLRETDGIDDLPLNTMVIDALLGKVVKDFSSLLLCQGTELGLFLKKILKGDIGCLSKREFVEAISLYLNQRSSLASHDFSKFCVCGGKRDSVRQNVNYSAKYAEVINTQEKQLQRMKYLFDDTKLEVKEIQSEWGQELSRLEHHIKSLEVASSSYHKVLEENRFLYNQVQDLKGAIRVYCRVRPFLQGQSNGQSTVDYIGENGDMMIVNPLKQGKDARRVFSFNKVFGTSVTQEQIYADTQPLIRSVLDGYNVCVFAYGQTGSGKTYTMSGPDLSAEDTWGVNYRALRDLFYITKERSDSIKYEVFVQMIEIYNEQVRDLLVSDGSNRRLDIRNTSQLNGLNVPDAFLVPVTCTRDVVNLMRIGQKNRAVGATALNERSSRSHSVLTVHVRGRELVSNSILRGCLHLVDLAGSERVDKSEAVGERLKEAQHINRSLSALGDVISALAQKSAHIPYRNSKLTQVLQDSLGGHAKTLMFVHINPELNAIGETISTLKFAERVASIELGAAQSNKETGEIRELKEEISSLKLTLERKETELEQLKAGNARNNTESPKPRAVSPYHLPKYGTSGNMKPETNQRIMDDRNLEARSCSSGKQRRSRFPSAFMDKESIPKMSLLTEEKIVSSVKGRSPSPPVRRSISTDRGSVIKSKVKNDTADNQPVLKHPFPARVPDSKFLGMMPMAASLENNARLHVNSPEPVKHEEEQFKQALSAVRQGGIKKTKVESKAKVKHHQPSPFKIQKPDLIPTFTSGMETPPKSDLSEPESDLRFVESAVHGALNLNKIRQNFPRNFQNLESRGIVQAGEPLSASKVENKLLNGSGSNYKEGNNTSMPEFRRSRSTPRGKFFGLS 1110
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car05g01187 1110 Coils Coil 771 812 - -
Car05g01187 1110 PANTHER HEAVY CHAIN, PUTATIVE-RELATED 22 1105 - -
Car05g01187 1110 MobiDBLite consensus disorder prediction 1077 1110 - -
Car05g01187 1110 Pfam Calponin homology (CH) domain 56 175 IPR001715 GO:0005515
Car05g01187 1110 MobiDBLite consensus disorder prediction 1077 1097 - -
Car05g01187 1110 MobiDBLite consensus disorder prediction 805 837 - -
Car05g01187 1110 ProSiteProfiles Kinesin motor domain profile. 436 764 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Car05g01187 1110 ProSiteProfiles Calponin homology (CH) domain profile. 53 175 IPR001715 GO:0005515
Car05g01187 1110 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 437 801 IPR027417 -
Car05g01187 1110 MobiDBLite consensus disorder prediction 989 1024 - -
Car05g01187 1110 PANTHER KINESIN-LIKE PROTEIN KLP-3 22 1105 - -
Car05g01187 1110 SMART ch_5 55 173 IPR001715 GO:0005515
Car05g01187 1110 Pfam Kinesin motor domain 442 764 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Car05g01187 1110 Gene3D Kinesin motor domain 379 766 IPR036961 -
Car05g01187 1110 SUPERFAMILY Calponin-homology domain, CH-domain 47 203 IPR036872 -
Car05g01187 1110 Gene3D - 44 175 IPR036872 -
Car05g01187 1110 PRINTS Kinesin heavy chain signature 511 532 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Car05g01187 1110 PRINTS Kinesin heavy chain signature 634 651 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Car05g01187 1110 PRINTS Kinesin heavy chain signature 665 683 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Car05g01187 1110 PRINTS Kinesin heavy chain signature 714 735 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Car05g01187 1110 SMART kinesin_4 434 772 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car05g01187 Car-Chr5 54652192 54660834 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car05g01187 372 764 Calmodulin-binding Proteins AT5G65930 39.599 2.10e-75 270
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car05g01187 K10406 - gmx:100786466 1800.79
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car05g01187 05 54652192 54660834 Car05g01187 05 54652192 54660834 ECH
Car05g01187 05 54652192 54660834 Car02g02166 02 51853829 51862266 PCT