Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car05g01186 ATGCCTGGAACCTTAAGGAATCTCTCACTTTCTCCCAAAAACTTCTCCTTCACATTCACCTTGCTTCTATTATTAAACTCTTTTCTTCTCTTTCCATTTTGTTACTCACTTAATGAACAAGGCCAAGCTCTTATAGCATGGAAAAACAGTTTAAACAATACTTCAGAAGCATTATCATCATGGAATTCTTTAACCACAAAACCATGCAACTGGTTTGGAGTGTTCTGCAATTCACAACAAGATGTTATAGAGATAAACTTGAAATCAATGAGCTTACAAGGCTCATTACCTTCAAATCTTCAATCTCTAAAGTCCTTAAAGATTCTCATCCTCTCATCAAACAATATCACAGGAAAGATACCGAAAGAGATCGGAGACTATCAGGAACTAATCGTCATTGATCTAAGTGGAAATTCTCTATTTGGTGAAATACCAGAAGAAATTTGCAGGCTAAGCAAACTTCAAAGTTTGTTTCTTCACACAAATTTCTTTGAAGGAAACATTCCATCCAACATTGGAAATTTAACAAGTCTTGTGAACTTTACACTCTATGATAATCATTTGAGTGGTGAAATTCCAAAGAGTATTGGCTTATTGGACAAGCTTCAAGTATTTAGAGCTGGTGGTAATAAGAATCTCAAGGGTGAGATTCCATTAGAAATTGGAAACTGCACCAGCTTGATCCTATTAGGCCTTGCAGAAACAAGTATTTCTGGAAGCATTCCTTCTTCAATCCAAATGCTGAAAAGAATCAAAACTTTAGCAATATACACAACTCTATTGTCAGGCTCGATTCCGAAGGAGATCGGCCATTGCAGTGAGTTGCAGAACATTTACTTGTATCAGAACTCTCTCTCAGGTTCGATTCCAACACAAATTGGAGAACTCAGCCAGCTCAAGAGTTTACTTTTATGGCAAAACAATTTAGTAGGTACTATTCCAGAAGAGATTGGAAACTGCAAAGAGATTCAAGTCGTTGACTTATCAGAGAATCTTCTAACAGGTAGCATACCGAAGAATTTTGGTCTGCTTTCAAATCTTCAAGAGCTTCAATTGAGTGTTAATCATCTCTCAGGTATTATACCACCTGAGATTTCAAATTGTACTTCTCTGACACAACTTGAAGTTGACAACAATGCTATATCTGGTGAGATTCCTCCTCTTATAGGCAACTTGAAAAGCTTAAGTTTGTTCTTTGCATGGCAGAACAAATTAACAGGAAAAATTCCAGATAGTCTTTCAGATTGTCAAGACCTTCAAGCACTTGATCTTTCTTACAATAATTTGATTGGTCCAATACCAAAAAAACTATTTGATTTGAAAAATCTCACAAAACTTTTACTTATTTCCAATGATTTATCAGGCTTTATACCACCTGATATAGGAAACTGCACAAGCCTCTATAGGCTTAGATTGAATCACAATAGATTAGCAGGTAACATTCCAAATGAGATTGGAAACTTGAAAAGTTTGAATTTTTTGGATATAAGTAGCAACCATCTTGTAGGTGAGATTCCTCCTCCACTTTCTAGATGTCAAAATCTTGAGTTTTTAGATCTTCATTCCAACAGTCTCATAGGTTCTTTTCCAGATTCTCTTCCAAAAAGCCTACAGTTGATTGACATGTCAGACAATAGGCTATCAGGTGAATTGAGTCACACTATTGGTTCATTAGTTGAGTTAAGCAAACTTAACTTAGGAAAGAATCAATTAAGTGGAAGAATCCCATCAGAGATCTTATCTTGTACTAAACTACAGCTTCTAGACCTTGGAAGCAATAGTTTCACAGGAGAAATTCCAAAGGAATTGAGTCTAATTCCTTCACTTGAAATCTCTCTCAATCTTAGCTTCAACCAGTTTTCTGGTGAAATTCCATCACAGTTCTCTAGTCTTAGCAAACTAGGAGTTCTTGATCTCTCACATAACAAACTCACAGGGAGTCTAGATTCTCTCTCTGACCTTCAAAACCTTGTTACCTTGAATGTTTCCTTCAATTCCTTCTCAGGTGAGTTACCTAACACTCCATTTTTTCATAAACTCCCTCTTAGTGATCTTGCTGAAAATGAAGGTCTTTACATTGCTAAAAGTGTTTTAACTCCTTCTGATAGAATTGAATCCAAAGGTCATGCAAAGTCAGTTATGAAATCTGTAATGTCCATTCTATTAAGCACAAGTGCAGTACTAGTCCTGCTCACAGTTTATATCGTCGTACGTTCGCATATAGCGAACAAAACCATCATGGAAAATGAAAGTTGGGAGGTGACTTTGTATCAAAAGTTTGAACTCTCAATAGATGACATTGTCTTGAATCTCACATCATCCAATGTGATTGGAACTGGAAGCTCAGGAGTTGTTTACAAGGTGACAATTCCGAACGGCGAAACACTTGCAGTTAAAAAGATGTGGTCATCAGAAGAATCAGGAGCATTCAATTCTGAGATTCAAACCTTAGGCTCAATCAGACACAAGAATATCATTAGGCTTCTAGGTTGGGGATCCAACAGGAACCTAAAGCTTCTGTTTTATGACTATCTTCCCAATGGAAGCCTTAGTTCATTGCTTCATGGCTCTGGAAAGGGAAAAGCAGAATGGGAAACAAGATATGATGTTATATTAGGTGTTGCTCATGCACTTTCATATTTGCATCATGATTGTGTTCCTGCTATAATGCATGGAGATGTCAAAGCCATGAATGTGTTATTGGGTCATGGATATCAACCTTATCTTGCTGACTTTGGTTTAGCAAGAATTGCAACTGAAAATGATGAAAATACTAATTCTATGCCAGTTCAAAGACATTATCTTGCTGGTTCATATGGATACATGGCTCCAGAACATGCATCAATGCAGCCTATAACTGAGAAGAGTGATGTTTACAGTTTTGGTATGGTTCTACTTGAGGTCTTAACAGGAAGGCACCCTTTAGATCCAACTCTTCCAGGGGGTGCAAACATGGTTCAATGGGTTAGGAGCCATTTAGCTAACAAAGGAGACCCTTCTGAAATTCTTGACACAAAGCTTAGAGGAAGAGCTGATCCTACCATGCATGAAATGCTACAAACTTTAGCAGTTTCATTTCTATGTGTAAGCACAAGAGCTGTTGACCGTCCAACAATGAAAGATGTTGTTGCAATGCTTAAAGAAATTAGACCTGTTGAAACCCCAAGAGGAGACAATGATGTATTGAAAGGAGGCATAACATCACATTCACATAGTTCTCCACCACCTCCTAAGAATGTACTTTCACATGGATCTTCTACTTGTTCCTATAATTTCTCAGATGGTTAG 3288 0.372 MPGTLRNLSLSPKNFSFTFTLLLLLNSFLLFPFCYSLNEQGQALIAWKNSLNNTSEALSSWNSLTTKPCNWFGVFCNSQQDVIEINLKSMSLQGSLPSNLQSLKSLKILILSSNNITGKIPKEIGDYQELIVIDLSGNSLFGEIPEEICRLSKLQSLFLHTNFFEGNIPSNIGNLTSLVNFTLYDNHLSGEIPKSIGLLDKLQVFRAGGNKNLKGEIPLEIGNCTSLILLGLAETSISGSIPSSIQMLKRIKTLAIYTTLLSGSIPKEIGHCSELQNIYLYQNSLSGSIPTQIGELSQLKSLLLWQNNLVGTIPEEIGNCKEIQVVDLSENLLTGSIPKNFGLLSNLQELQLSVNHLSGIIPPEISNCTSLTQLEVDNNAISGEIPPLIGNLKSLSLFFAWQNKLTGKIPDSLSDCQDLQALDLSYNNLIGPIPKKLFDLKNLTKLLLISNDLSGFIPPDIGNCTSLYRLRLNHNRLAGNIPNEIGNLKSLNFLDISSNHLVGEIPPPLSRCQNLEFLDLHSNSLIGSFPDSLPKSLQLIDMSDNRLSGELSHTIGSLVELSKLNLGKNQLSGRIPSEILSCTKLQLLDLGSNSFTGEIPKELSLIPSLEISLNLSFNQFSGEIPSQFSSLSKLGVLDLSHNKLTGSLDSLSDLQNLVTLNVSFNSFSGELPNTPFFHKLPLSDLAENEGLYIAKSVLTPSDRIESKGHAKSVMKSVMSILLSTSAVLVLLTVYIVVRSHIANKTIMENESWEVTLYQKFELSIDDIVLNLTSSNVIGTGSSGVVYKVTIPNGETLAVKKMWSSEESGAFNSEIQTLGSIRHKNIIRLLGWGSNRNLKLLFYDYLPNGSLSSLLHGSGKGKAEWETRYDVILGVAHALSYLHHDCVPAIMHGDVKAMNVLLGHGYQPYLADFGLARIATENDENTNSMPVQRHYLAGSYGYMAPEHASMQPITEKSDVYSFGMVLLEVLTGRHPLDPTLPGGANMVQWVRSHLANKGDPSEILDTKLRGRADPTMHEMLQTLAVSFLCVSTRAVDRPTMKDVVAMLKEIRPVETPRGDNDVLKGGITSHSHSSPPPPKNVLSHGSSTCSYNFSDG 1095
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car05g01186 1095 Gene3D Ribonuclease Inhibitor 444 700 IPR032675 -
Car05g01186 1095 Pfam Protein kinase domain 774 1042 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car05g01186 1095 SUPERFAMILY L domain-like 35 314 - -
Car05g01186 1095 Pfam Leucine rich repeat N-terminal domain 38 77 IPR013210 -
Car05g01186 1095 PANTHER LRR RECEPTOR-LIKE KINASE FAMILY PROTEIN 4 1062 - -
Car05g01186 1095 ProSiteProfiles Protein kinase domain profile. 771 1049 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car05g01186 1095 Pfam Leucine rich repeat 612 666 IPR001611 GO:0005515
Car05g01186 1095 Pfam Leucine rich repeat 323 381 IPR001611 GO:0005515
Car05g01186 1095 Gene3D Phosphorylase Kinase; domain 1 735 844 - -
Car05g01186 1095 ProSitePatterns Serine/Threonine protein kinases active-site signature. 889 901 IPR008271 GO:0004672|GO:0006468
Car05g01186 1095 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE FAMILY PROTEIN-RELATED 4 1062 - -
Car05g01186 1095 ProSiteProfiles Leucine-rich repeat profile. 633 655 IPR001611 GO:0005515
Car05g01186 1095 SUPERFAMILY RNI-like 612 677 - -
Car05g01186 1095 SUPERFAMILY RNI-like 289 610 - -
Car05g01186 1095 SMART serkin_6 771 1027 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car05g01186 1095 PRINTS Leucine-rich repeat signature 419 432 - -
Car05g01186 1095 PRINTS Leucine-rich repeat signature 631 644 - -
Car05g01186 1095 MobiDBLite consensus disorder prediction 1065 1086 - -
Car05g01186 1095 Gene3D Ribonuclease Inhibitor 298 443 IPR032675 -
Car05g01186 1095 SMART LRR_typ_2 488 512 IPR003591 -
Car05g01186 1095 SMART LRR_typ_2 631 654 IPR003591 -
Car05g01186 1095 SMART LRR_typ_2 440 464 IPR003591 -
Car05g01186 1095 SMART LRR_typ_2 151 175 IPR003591 -
Car05g01186 1095 SMART LRR_typ_2 558 582 IPR003591 -
Car05g01186 1095 SMART LRR_typ_2 103 127 IPR003591 -
Car05g01186 1095 SMART LRR_typ_2 296 320 IPR003591 -
Car05g01186 1095 SMART LRR_typ_2 344 368 IPR003591 -
Car05g01186 1095 ProSitePatterns Protein kinases ATP-binding region signature. 777 800 IPR017441 GO:0005524
Car05g01186 1095 Gene3D Ribonuclease Inhibitor 190 291 IPR032675 -
Car05g01186 1095 Gene3D Ribonuclease Inhibitor 39 189 IPR032675 -
Car05g01186 1095 SUPERFAMILY Protein kinase-like (PK-like) 768 1046 IPR011009 -
Car05g01186 1095 MobiDBLite consensus disorder prediction 1054 1086 - -
Car05g01186 1095 Gene3D Transferase(Phosphotransferase) domain 1 845 1061 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car05g01186 Car-Chr5 54644260 54648392 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car05g01186 34 1094 Receptor kinase-like Gene Family AT5G56040 66.292 0.0 1407
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Car05g01186 Pkinase 1.3e-37 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car05g01186 - - gmx:100802880 1768.82