Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car05g01170 ATGAAATCAGTGATTGAGAGATATAACATTTGCAAGGAAGACCAACAAGTGACAGATCCAGAATCTGAAGTCAAGTTTTGGCAAAGGGAGGCAGACATTTTAAGGCAAGAATTACAGAATCTACAAGAAAACCATCGGCAATTGATGGGAGAACAACTTTATGGTTTGAGTATCAGAAATCTACAAGATCTAGAGAATCAATTGGAACTGAGTCTCCAAGGAGTCCGCATGAAAAAGGAGAAAATTCTGACAGACGAAATCCAAGAGCTGAACCGAAAGGGAAACATAATCCATCAGGAAAATGTGGAACTTTATAAGAAGGTAAAAATCTCATTCAACAAGAAAACACACAACTACACAAATAGGTCTACGGCACAACTGATACCACAACAATTAAACACGCATTTGTTCAATTTCCGTATGGTGTTCGTGGAGGAGGAGAATATCCACAGACATTATTTCAACTTCAGTTATGCCAGCCTGAACAAGAACAGTATTGTGAGACCTCAGGCAGTGCAAGTGCAACAAAATGAATGTGTCAAGAGTCAAGACTCTCAAGTCTTAAAAGAAAGACATAAATTGACATTTCTATGTTATGCAGCATACATAATAATCACATTTTGGTGA 627 0.3764 MKSVIERYNICKEDQQVTDPESEVKFWQREADILRQELQNLQENHRQLMGEQLYGLSIRNLQDLENQLELSLQGVRMKKEKILTDEIQELNRKGNIIHQENVELYKKVKISFNKKTHNYTNRSTAQLIPQQLNTHLFNFRMVFVEEENIHRHYFNFSYASLNKNSIVRPQAVQVQQNECVKSQDSQVLKERHKLTFLCYAAYIIITFW 208
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car05g01170 208 ProSiteProfiles K-box domain profile. 24 116 IPR002487 GO:0003700|GO:0005634|GO:0006355
Car05g01170 208 PANTHER SERUM RESPONSE FACTOR HOMOLOG 1 111 - -
Car05g01170 208 PANTHER MADS-BOX TRANSCRIPTION FACTOR 23 ISOFORM X1 1 111 - -
Car05g01170 208 Pfam K-box region 20 108 IPR002487 GO:0003700|GO:0005634|GO:0006355
Car05g01170 208 Coils Coil 24 51 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car05g01170 Car-Chr5 54496743 54498561 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car05g01170 1 110 MADS-box Gene Family AT3G57230 63.964 3.96e-45 147
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car05g01170 K09264 - gmx:100795778 185.267