Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car05g01136 ATGGATATGGGTTTGATGGATCTGAGTTTGCTGGATGTGGGTTCGATGGATCTGAGTTTGTTATGGagtgttgtctctcttcttcctcttttcattgttaacatggtatcagagctttggttgattttgggatctgcaataaatactataaagaagaagagagagattattttgataggaaagacaaccaccaaaagagagaCAACACATGGTATCAGAGCAACACAGGCTCAGTCAGGAACTGGGAAGACAACAACATTTTGTTCTGGAATTTTGCAGCAGCTCGATTACAGATTGGTTCAGTGTCAGGCTTTGGTTTTGGCCCCTACGAGGGAGCTAGCTCAACAGATTGAGAAGGTGATGTGA 366 0.2896 MDMGLMDLSLLDVGSMDLSLLWSVVSLLPLFIVNMVSELWLILGSAINTIKKKREIILIGKTTTKRETTHGIRATQAQSGTGKTTTFCSGILQQLDYRLVQCQALVLAPTRELAQQIEKVM 121
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car05g01136 121 PANTHER EUKARYOTIC INITIATION FACTOR 4A-3 75 121 - -
Car05g01136 121 Pfam DEAD/DEAH box helicase 75 119 IPR011545 GO:0003676|GO:0005524
Car05g01136 121 Gene3D - 45 121 IPR027417 -
Car05g01136 121 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 74 120 IPR027417 -
Car05g01136 121 PANTHER RNA HELICASE 75 121 - -
Car05g01136 121 PANTHER EUKARYOTIC INITIATION FACTOR 4A-2 75 121 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car05g01136 Car-Chr5 53750787 53751832 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car05g01136 76 121 Eukaryotic Initiation Factors Gene Family AT3G13920 89.130 8.70e-23 89.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car05g01136 K03257 - thj:104815634 88.9669