Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car05g01135 ATGTCTCCAATCACCACGCTCCTCTTTTTCTTTTTCTTCTTCCAAATAACACTCTCACTGTCACATCAAAACACAACATTCAACTTCCCTTCTTTCACCCTCCGCAACATAACCCTCCTCGGCGACTCCTTCCTCCACGACGGCATCGTCGGTCTCACAAGCTCCACCACCGTCCCTACTTCCACCTCCGGTACTCTCCTTTACAACAACCCTATCTTTCACTCTTCCAATTTTTCCTCTTTCTCCTTTTCCACTAATTTCACTTTCTCCATCACAAATTCAAACCCTAACCCTCCTCCTTCTTCCTCACTCAACCATTTCTCATTTTTTCTCAATTCCACCAAACACTTCATTTCACTTGATTTTCACACCAATGATAACACACTTGGTTTCAATTTCAACAATTTCAGCAATTCAATCCAAACCGTTGGTTTCAATTTCACTAGTGGAAATCTAATCACTTCTTGGATTGACTATAACAAGAGCTTTAACAAAAACTTGAGTGTTTTCTTAAGCTATGAAAATTCGAGTTTTTCGAAGCCGGAAAAACCGGTTTTGAGTGTTGATGTTGATCTTTATGAGTATTTCAATGAGGTTGTTTATTTGGGGTTTTTGGGTTATGTTGAAGGAAGTACTGAACTTCAACAAATCATGAAATGGAGCTTTGAGTTTTTTCAGTTTAGTCAAAATAAAAATTCAAGCATGCATAATTTGGGTTATCAAGTTGATGATATTCCACCTTCAAACACAACAAAAAACCATCATGGAAAGAGATTTGTGATTGGTTTTTGTGTTGCTGTTGTGGGTCCTGCTTTGTTCTTTGTGGTGCTTTTGGTTTTGGGGTATGTTTCTTTTAGGAAATGGAGTAGTTTAAGGAAGCTTAAGAAGAATGAAAGTTCTATGGGGTGTCCTAAGAAGTTTAGTTACAAGGAATTGAAGTTTGCTACTAAAGGGTTTCATGGTTCAAGGATAATTGGGAATGGTTCATTTGGGACTGTTTATAAGGCTTTGTTTGTTACTTCTGGAACAGTTGCTGCTGTTAAAAGATCAAGACATTCACATGAAGGGAAAACTGAGTTTTTATCTGAGTTATCTATTATAGCTGGATTAAGGCACAAGAATTTGGTTCAACTTTTAGGTTGGTGTGTTGAGAAAAGTGAACTTTTGCTTGTGTATGAGTTTATGGTTAATGGCAGTTTAGATAAGTTGCTTTACAAAGAATCTGAGTGTGTTATTTTGTTGAGTTGGGTTCAAAGACATAACATTGTTGTTGGGTTGGCTTCTGTTTTGACTTATCTTCACCAAGAATGTGAGCAAAGAGTGATTCATAGAGATATTAAGACGGCGAATATATTGCTAGATGGAAATTTGAATCCAAGATTAGGGGATTTTGGATTGGCAAAGCTTATGGATCATGATAAGAGTCCGGTTTCGACATTAACGGCCGGAACAATGGGATACCTAGCTCCCGAGTATCTTCAATATGGGAAAGCGACCGATAAGACCGATGTGTTTAGCTTTGGAGTTGTTGTTCTTGAAGTTGCTTGTGGGAGAAGACCAATTGAGAAAGAGGGTCAAGAGATGGTGAATTTGGTTGATTGGGTTTGGGGACTTTACTCACAAGGGAAGATAATTGAGGCTGTTGATAAGAGATTGAATGGTGAGTTTCATGAGGATGAAATGAGAAAAATGTTGCTATTAGGTTTGAGTTGTGCAAATCCAAATAGTGATGAAAGGCCTTCTATGAGAAGAGTTTTGCAAATTCTTAACAATGAAGCTTTACCTCTTGTTGTGCCTAAAGTGAAACCTTGCCTTAGTTTTTCAATTGGATTGCCTTTGACTCTTGAGGAGATTGTTTCTGATATTGGTGAAAGGTTTGGTTCAAATCAATATACGTGCAAGATCATAATTGAGCCAAGTTGA 1923 0.3786 MSPITTLLFFFFFFQITLSLSHQNTTFNFPSFTLRNITLLGDSFLHDGIVGLTSSTTVPTSTSGTLLYNNPIFHSSNFSSFSFSTNFTFSITNSNPNPPPSSSLNHFSFFLNSTKHFISLDFHTNDNTLGFNFNNFSNSIQTVGFNFTSGNLITSWIDYNKSFNKNLSVFLSYENSSFSKPEKPVLSVDVDLYEYFNEVVYLGFLGYVEGSTELQQIMKWSFEFFQFSQNKNSSMHNLGYQVDDIPPSNTTKNHHGKRFVIGFCVAVVGPALFFVVLLVLGYVSFRKWSSLRKLKKNESSMGCPKKFSYKELKFATKGFHGSRIIGNGSFGTVYKALFVTSGTVAAVKRSRHSHEGKTEFLSELSIIAGLRHKNLVQLLGWCVEKSELLLVYEFMVNGSLDKLLYKESECVILLSWVQRHNIVVGLASVLTYLHQECEQRVIHRDIKTANILLDGNLNPRLGDFGLAKLMDHDKSPVSTLTAGTMGYLAPEYLQYGKATDKTDVFSFGVVVLEVACGRRPIEKEGQEMVNLVDWVWGLYSQGKIIEAVDKRLNGEFHEDEMRKMLLLGLSCANPNSDERPSMRRVLQILNNEALPLVVPKVKPCLSFSIGLPLTLEEIVSDIGERFGSNQYTCKIIIEPS 640
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car05g01135 640 Pfam Protein kinase domain 320 587 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car05g01135 640 SUPERFAMILY Protein kinase-like (PK-like) 302 611 IPR011009 -
Car05g01135 640 Gene3D - 23 224 - -
Car05g01135 640 Gene3D Phosphorylase Kinase; domain 1 283 394 - -
Car05g01135 640 ProSiteProfiles Protein kinase domain profile. 319 594 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car05g01135 640 Gene3D Transferase(Phosphotransferase) domain 1 395 594 - -
Car05g01135 640 CDD STKc_IRAK 325 591 - -
Car05g01135 640 PANTHER L-TYPE LECTIN-DOMAIN CONTAINING RECEPTOR KINASE S.7-RELATED 25 621 - -
Car05g01135 640 SMART serkin_6 319 594 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car05g01135 640 ProSitePatterns Serine/Threonine protein kinases active-site signature. 441 453 IPR008271 GO:0004672|GO:0006468
Car05g01135 640 PANTHER - 25 621 - -
Car05g01135 640 SUPERFAMILY Concanavalin A-like lectins/glucanases 24 224 IPR013320 -
Car05g01135 640 ProSitePatterns Protein kinases ATP-binding region signature. 325 348 IPR017441 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car05g01135 Car-Chr5 53740910 53742883 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car05g01135 1 624 Receptor kinase-like Gene Family AT5G55830 52.709 0.0 642
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_L-LEC Car05g01135 Pkinase 2.3e-50 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car05g01135 - - gmx:100808744 720.694
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car05g01135 05 53740910 53742883 Car05g01135 05 53740910 53742883 ECH
Car05g01135 05 53740910 53742883 Car02g02141 02 51672768 51674830 PCT