Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car05g01130 ATGGGAACTTACATTGAAAATTTTGTAGAAGAGAAAGAACACATTTTTCGTAGCCAATACTCGCCTGTTCCGGTTCCGGACAATGTGACATTACCAGAATTTGTGCTACAAAATGTTGAATTGTATGGTGATAAAGTTGCATTTGTGGATGCTGAGAGTGGAAAATGTGTCACATATAGTGAAGTTGAGAGAGATATACATAGATTTTCAAAGGCTTTGAGATCTCTTGGTTTGAGAAAAGGGAATGTTGTGATTGTAGTGCTTCCAAATATTGTTGAATATGCAATTGTTGCTTTGGGGATTATGGATTCTGGTGGTGTGTTTTCAGGTGCAAATCCAACTTTGCATGCTTCAGAAATTAAGAAACAAGCTGAGTCTGCTGATGCCAAATTAATTGTCACAAATAGTGTAACTCATGAAAAGGTGAAAAATCTAGGGCTACCAATTATTGTACTAGGAGATGAACTAATTGAAGATGCTATGAATTGGAACAAACTTCTTGAAGCAGCAGACAGGGCAGGTGATGACTCAATGAAGGAACAAATTCACCAAAATGATCTTTGTGCCATGCCATTCTCATCAGGCACAACAGGATTGTCAAAGGGTGTAATGCTCACTCATAGAAACCTAGTAGCAAATCTTTGTTCCACACTTTTTGGTGTAGCACAAGAAATGATTGGTCAAGTCACAACATTAGGCTTAATTCCATTTTTTCACATTTATGGCATCACTGGAATATGTTGTGCTACTATTAGGAACAAAGGGAAAGTTGTTGTCATGGGAAGGTTTGACTTGAAAACATTTTTGAATGCTTTGATAACACATGAGGTCACATTTGCACCTATTGTTCCACCTATTATTCTTGGATTAGTTAAAAATCCTATTGTGGATGAATTTGATCTCACTAAGCTTAAACTTCAAGCTATTATGACTGCAGCAGCACCACTTGCACCTGAAATACTCACTTCCTTTGAACACAAGTTTCCTGGTGTTCTTGTCCAAGAGGCATATGGACTAACTGAACATAGTTGCATAACACTTACACATGCACAAAAAGGATATGGAAATACACATAAAAATTCAGTTGGATTCATCCTTCCAAATTTGGAAGTGAAGTTTATTGATCCTGATACAGGTAGATCTCTCCCAAGGAACACACCAGGGGAACTTTGTGTAAGGAGCCAATGTGTAATGCAAGGTTACTATAAACAGGTGGATGAGACTGCTCAAACTATTGACAACAATGGATGGCTTCACACTGGTGATGTAGGATTCATAGACGATGAAGAAAATGTTTTTATTGTTGATCGTATTAAGGAGTTGATTAAATATAAAGGCTTCCAAGTAAAAGCTATTCTGTTGTCTCATTCGTCGGTCGAAGATGCAGCTGTTGTACCGTTACCGAACGAAGAGGCAGGGGAAATCCCAGCAGCAAGTGTTGTTTTAAGCATAGGTGCAAAAGAGAGTGAACAAGACATTATGAACTATGTTGCTTCCAATGCTGCTCATTATAAGAAAGTGAGAGTGGTTCACTTTGTGGAAGCTATACCAAAATCACCTTCTGGTAAAATAATGAGAAGGCTTATCAAAGAAAAGATGGTGGAAAAAATGAAGGAAAATTCCCTAACAAAATCCAACACATCTTCAAATTAG 1653 0.3763 MGTYIENFVEEKEHIFRSQYSPVPVPDNVTLPEFVLQNVELYGDKVAFVDAESGKCVTYSEVERDIHRFSKALRSLGLRKGNVVIVVLPNIVEYAIVALGIMDSGGVFSGANPTLHASEIKKQAESADAKLIVTNSVTHEKVKNLGLPIIVLGDELIEDAMNWNKLLEAADRAGDDSMKEQIHQNDLCAMPFSSGTTGLSKGVMLTHRNLVANLCSTLFGVAQEMIGQVTTLGLIPFFHIYGITGICCATIRNKGKVVVMGRFDLKTFLNALITHEVTFAPIVPPIILGLVKNPIVDEFDLTKLKLQAIMTAAAPLAPEILTSFEHKFPGVLVQEAYGLTEHSCITLTHAQKGYGNTHKNSVGFILPNLEVKFIDPDTGRSLPRNTPGELCVRSQCVMQGYYKQVDETAQTIDNNGWLHTGDVGFIDDEENVFIVDRIKELIKYKGFQVKAILLSHSSVEDAAVVPLPNEEAGEIPAASVVLSIGAKESEQDIMNYVASNAAHYKKVRVVHFVEAIPKSPSGKIMRRLIKEKMVEKMKENSLTKSNTSSN 550
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car05g01130 550 Pfam AMP-binding enzyme 37 444 IPR000873 -
Car05g01130 550 Gene3D - 13 439 IPR042099 -
Car05g01130 550 Pfam AMP-binding enzyme C-terminal domain 451 523 IPR025110 -
Car05g01130 550 PANTHER 4-COUMARATE--COA LIGASE-LIKE 1 8 536 - -
Car05g01130 550 ProSitePatterns Putative AMP-binding domain signature. 190 201 IPR020845 -
Car05g01130 550 PANTHER LONG-CHAIN-FATTY-ACID--COA LIGASE 8 536 - -
Car05g01130 550 SUPERFAMILY Acetyl-CoA synthetase-like 14 536 - -
Car05g01130 550 Gene3D - 440 538 IPR045851 -
Car05g01130 550 CDD 4CL 25 527 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car05g01130 Car-Chr5 53651395 53654309 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car05g01130 10 534 Monolignol Biosynthesis Gene Families AT1G62940 71.617 0.0 774
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car05g01130 K01904 - gmx:100811418 947.577