Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car05g01113 ATGACCGTAGACGACGATGATAGGTGGTTTGTGGAATGGAAAGAACAATTTGTTTCGCAAGAGCGCGGCCATCGTGTGGTTCATTATTACCTAAAGGATTCTGCTGGGGAATCCATCCTTGCAGTTGTGGGGACTGAGAGGAGTATTAGACACATGTGCTATGTTGTTGCTGAGGAGTTCCTTGAAGTTTTTGGAATGGAGTGTTCTATTCCACCTGGTTTCAAATGGAGATCTAGAAGAGAGGTGGTGGATTGGCTTACGTCGATGCTATCGAAGCAGCATGTGCGGGGAGATAGAAGTGTATGGCCTGCTCATAATTTGGCAATAGTTCATGAGATCACAAACGGTAGTATCAATGAAGTTGCACAAATGGTGGATGACAAGGACATTCCAAAGAGTAACTCCAAATTATCCAATTCAGACATTGTTTGGTCAGGACTTGCGTGGACATGTAGCAAACAACTCAAGCATTATCCCGCATTTTGCCGGAATGGCATCCAAATAGGGATTCAATCCTTTGTATTTGTCATGGGCAATGGAGAGAGTCATTATGTCGCTTATTTAGAAGATATGTATGAAGACAGGAGAGGGCAGAAAAAGGTTAAAGTAAGGTGGTTTCACCACAATCAAGAAGTCAAGGGTGTAATTCCCGTACGAAATCCTCACCCTCGGGAAGTTTTCATCACACCTTATTCTCAAGTCATCAGCACAGAGTGTGTTGATGGTCCTGCCACAGTCTTAACTCGCGAGCACTATGAAAAATGCACGCCTTATTTTTCACCCGCTTCAACAGACAGAATACATTTGTGCTTTAGGCAATTAAAAGGTAACAAAGTCAAGCCCTTTGACTTAAGTAAACTGCGTGGCTACTATGCACAGCCGGTTCTCTCTTCCTTGCACGATGATACTGTCCACATCACCGAGTCTCTGAGCAACAGTCTCACAGGAGAAGACGATGATATTAATGCAGGTGATGATCCAAAGAGGGGAACCAAGAGGAGTAGAAGTGTTAAGGGGTCTCCTCAATTTTGTAACGGTCGACAAGGAGTTAGGAAGTTGATTAGAAATAAGCAGATGATGGGATATCAAACCTTCCAAGTTGTTAATTATGCAAGGCCGAATAGGAGATTGCTTTCTGTGAAGCCGGTTGAATGTCAACATTGGTATAACTCAACGTACAAAGTTGATGACAAGATAGAATTACTCTCTCAAGATAGTGGCATCCGAGGCTGCTGGTTCCGGTGTACAATTGTGCAGGTAGCTCGGAAACAACTGAAAGTCCAATATGATGATGTTCAGGATGAAGATGGAAGTGGAAATCTTGAGGAGTGGATCCCTGCTATTAAGTTAGCAAAGCCTGATAAACTTGGGATGAGACAACCTGGTCGGTCGACCATCAGGCCAGCTCCACCTCATGAAGAACAAGAAGTGATTGCCGAGGTTGGAACTGCCGTTGATGCATGGTGGAGTGATGGCTGGTGGGAGGGTGTTGTAACTTCAATTAACAACTGTGGGGATGACTGCGTTCAAGTCTACTTTCCTGGTGAAAGCTTGCTAATGACAGTACATAAGAAGGATTTAAGAATATCTAGAGATTGGTTAGGCGAAAAGTGGATTAATATAAAGGCTAAGCCTGATATAATCCCAACTATAAATACAACTAATAGCTTTAACACGAAACAGACCATGTCGCTATCTAAGGCTGAAGATGTAGACGGTGTCAATTTTGCTAATTCATGCCATGAAGTTCCAGCTGATGAGAAGTCTAATGAACCTGATATTGCTGAATACAATATACCCCCTTCAGAAGAAAGTACCCAAGTTGATGATTTTGAAGATAATGATGGTAATAATATTGTTAAGGACAACAATGAGAATGGTGATAACAAGAATGACAGCAGTAGGGATGTGGAGGTGATTGGGACTTCTGGACTTGACTGTAAAGTTGTAGAACTAATGGAAGTGGTTGTGTAA 1974 0.426 MTVDDDDRWFVEWKEQFVSQERGHRVVHYYLKDSAGESILAVVGTERSIRHMCYVVAEEFLEVFGMECSIPPGFKWRSRREVVDWLTSMLSKQHVRGDRSVWPAHNLAIVHEITNGSINEVAQMVDDKDIPKSNSKLSNSDIVWSGLAWTCSKQLKHYPAFCRNGIQIGIQSFVFVMGNGESHYVAYLEDMYEDRRGQKKVKVRWFHHNQEVKGVIPVRNPHPREVFITPYSQVISTECVDGPATVLTREHYEKCTPYFSPASTDRIHLCFRQLKGNKVKPFDLSKLRGYYAQPVLSSLHDDTVHITESLSNSLTGEDDDINAGDDPKRGTKRSRSVKGSPQFCNGRQGVRKLIRNKQMMGYQTFQVVNYARPNRRLLSVKPVECQHWYNSTYKVDDKIELLSQDSGIRGCWFRCTIVQVARKQLKVQYDDVQDEDGSGNLEEWIPAIKLAKPDKLGMRQPGRSTIRPAPPHEEQEVIAEVGTAVDAWWSDGWWEGVVTSINNCGDDCVQVYFPGESLLMTVHKKDLRISRDWLGEKWINIKAKPDIIPTINTTNSFNTKQTMSLSKAEDVDGVNFANSCHEVPADEKSNEPDIAEYNIPPSEESTQVDDFEDNDGNNIVKDNNENGDNKNDSSRDVEVIGTSGLDCKVVELMEVVV 657
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car05g01113 657 SMART BAH_4 166 285 IPR001025 GO:0003682
Car05g01113 657 ProSiteProfiles BAH domain profile. 166 285 IPR001025 GO:0003682
Car05g01113 657 Gene3D - 134 280 IPR043151 -
Car05g01113 657 PANTHER AGENET DOMAIN-CONTAINING PROTEIN-RELATED 6 633 - -
Car05g01113 657 MobiDBLite consensus disorder prediction 315 345 - -
Car05g01113 657 MobiDBLite consensus disorder prediction 614 635 - -
Car05g01113 657 PANTHER OS07G0607300 PROTEIN 6 633 - -
Car05g01113 657 Pfam BAH domain 172 267 IPR001025 GO:0003682
Car05g01113 657 SMART agenet_At_2 477 535 IPR014002 -
Car05g01113 657 SMART agenet_At_2 391 456 IPR014002 -
Car05g01113 657 MobiDBLite consensus disorder prediction 582 636 - -
Car05g01113 657 CDD BAH_plant_1 161 290 - -
Car05g01113 657 Pfam Agenet domain 396 471 IPR008395 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car05g01113 Car-Chr5 53092725 53096910 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car05g01113 403 533 PHD Transcription Factor Family AT5G58610 29.630 1.02e-11 66.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car05g01113 - - mtr:MTR_3g058500 1077
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car05g01113 05 53092725 53096910 Car05g01113 05 53092725 53096910 ECH