Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car05g01108 ATGGCTCTCAACTTGTTCACCCTTTTCACTATTTTTCTTTTCATGATCATTGCACTAAAACTAATAAGGAATCATTACAAAAAATCTGATTCAACTAGTACAAATCTACCCCCAAGTCCATGGAAACTACCCATCATAGGAAATATTCTCCATCTTGTTACATCAAACCCACCTAGAAAATTAAGAGATCTAGCCAAAAGATATGGACCCTTGATGCATCTTCAACTTGGTGAGATCTTCTTCATTGTTGTTTCCTCAGCAGAAGTTGCTAAAGAAGTTCTAAAAACTCATGATATTACTTTTGCATCAAGGCCTCATCTTATGGCCACAGATATTGCATCCTATAATTCCACTGATATAGCTTTTTCACCTTATGGTGATTATTGGAGACAACTTAGAAAGATTTGTGCTATTGAGCTTTTGAGTGTAAGAAGGGTCAAATCTCTTTGGCCAATAAGAGAAAAAGAGATGAATTCTCTCTTAAAAAAGATTGCTTCAAATGAAGGATCACAATTCAATCTCTCTCAAGCTGTTATTTCATTCATGTATACATTCACTTCGAAGGCTGCATTTGGTAAGAAATATGCAGAAGAAGAAGAGTTCATATCAGTTGCAAAACAACTCATAAAGCTTGCTGGAGGTTTCTATATTGGAGACTTGTTTCCTTCTGCTACATGGCTTCACAATCTCTCTGGAATGAAGCCTAAGCTTGAGAAGTTAAGTCAACATGTGGATAGGATACTAGGACATATCATCAATGATCATAAAGAGGAAAGGTCAAGAAGAGCTAAAGAAGGTGTTGCTGAAGCAGAGGAAGATCTTATTGACGTTCTCTTGAAATTTGAGGATAGTAGCAATGATCTGGATTTTTATTTAACTTCTGATAATATCAAGGCTATAATTTTGGATGTGTTTATTGCTGGAAGTGAGACTGCAGCAACTACCATTAATTGGGCAATGGCTGAGATGATAAAAAATCCAAGAGTTCTGAAGATAGCACAAGCTGAAGTGAGGGACAAAATTAATAGGAGAGGAATGATTGATGAAACCACACTTGGTGAGTTAAAATATTTGAAAGCAGTAATCAAAGAGTCACTTAGATTACACCCTTCTATTCCTCTCCTTCTTCCAAGGGAATGTAGACAAGCTTGTGTGATTAATGGTTATCACATACCTGTCAAAAGTAGAGTTATAATTAATGCTTGGGCGATTGGAAGAGATCCAAAATATTGGATTGACCCTGATAAGTTTTATCCTGAAAGATTTATTGATAGTTCTATTGACTACAAAGGAACCAACTTTGAGTATATTCCATTTGGTGGTGGAAGGAGAATTTGTCCAGGTATGAACTATGGTATAGCAAATGTTGAGCAGACCCTTGCAATGTTTTTGTATCATTTTGATTGGAAGCTTCCCAATGGAATGAAAAATGAGGAGTTAGAATTGAGAGAGGAGTTTGGAGCTGCTATGTCAAGAAAAGGTGACCTTTACTTGATTCCCATAATTTCTCATCCTTTGTTTGTAACATAA 1530 0.3601 MALNLFTLFTIFLFMIIALKLIRNHYKKSDSTSTNLPPSPWKLPIIGNILHLVTSNPPRKLRDLAKRYGPLMHLQLGEIFFIVVSSAEVAKEVLKTHDITFASRPHLMATDIASYNSTDIAFSPYGDYWRQLRKICAIELLSVRRVKSLWPIREKEMNSLLKKIASNEGSQFNLSQAVISFMYTFTSKAAFGKKYAEEEEFISVAKQLIKLAGGFYIGDLFPSATWLHNLSGMKPKLEKLSQHVDRILGHIINDHKEERSRRAKEGVAEAEEDLIDVLLKFEDSSNDLDFYLTSDNIKAIILDVFIAGSETAATTINWAMAEMIKNPRVLKIAQAEVRDKINRRGMIDETTLGELKYLKAVIKESLRLHPSIPLLLPRECRQACVINGYHIPVKSRVIINAWAIGRDPKYWIDPDKFYPERFIDSSIDYKGTNFEYIPFGGGRRICPGMNYGIANVEQTLAMFLYHFDWKLPNGMKNEELELREEFGAAMSRKGDLYLIPIISHPLFVT 509
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car05g01108 509 PRINTS P450 superfamily signature 307 324 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Car05g01108 509 PRINTS P450 superfamily signature 360 371 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Car05g01108 509 PRINTS P450 superfamily signature 437 446 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Car05g01108 509 SUPERFAMILY Cytochrome P450 37 499 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Car05g01108 509 Gene3D Cytochrome P450 29 494 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Car05g01108 509 Coils Coil 253 273 - -
Car05g01108 509 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 439 448 IPR017972 GO:0005506|GO:0016705
Car05g01108 509 PRINTS E-class P450 group I signature 65 84 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Car05g01108 509 PRINTS E-class P450 group I signature 89 110 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Car05g01108 509 PRINTS E-class P450 group I signature 296 313 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Car05g01108 509 PRINTS E-class P450 group I signature 316 342 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Car05g01108 509 PRINTS E-class P450 group I signature 359 377 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Car05g01108 509 PRINTS E-class P450 group I signature 400 424 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Car05g01108 509 PRINTS E-class P450 group I signature 436 446 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Car05g01108 509 PRINTS E-class P450 group I signature 446 469 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Car05g01108 509 PANTHER CYTOCHROME P450 71B11-RELATED 9 504 - -
Car05g01108 509 Pfam Cytochrome P450 37 481 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Car05g01108 509 PANTHER CYTOCHROME P450 FAMILY 71 PROTEIN 9 504 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car05g01108 Car-Chr5 52950598 52959986 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car05g01108 12 500 Cytochrome P450 AT3G26310 40.443 6.18e-135 398
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car05g01108 - - mtr:MTR_3g058060 672.93