Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car05g01106 ATGAAGCCTAAACTTGAGAAGTTAAGCCAACAAGTAGATAGGATACTAGGACATATCATCAATGATCATAGAGAGGCAAGGTCAAAAAGAGCTATAGAAGGTGTTGCTGAATCAGAGGAAGATCTTATTGATGTTCTCTTGAAATTTGAGGATAGTAACAAGGATCTGGATTTTTATTTAACTACAGATAATATCAAGGCTATAATCTTGTATGTGTTTGCTGCTGCTGGAAGTGAGACTGCAGCAATTATCATTAATTGGGCAATGACAGAGATGATAAAAGATCCAAGAGTTCTGAAGATAGCACAAGCTGAAGTGAGAGATAAAATTAACAGGAGAGGAATAATTGATGAAACCACACTTGGTGAGTTAAAATATTTGAAAGCAGTAATCAAAGAGTCACTAAGATTACACCCTTCTATTCCTCTCCTTCTTCCAAAGGAATGTGGACAAGCATGTGAGATTGATGCTTGGGATATTGGAAGAGATCCAAAATATTGGACTGACCCAGATAAGTTTTATCCTGAAAGGTTATTGATAGTTCTATTGACTACAAAGGAACCAACTTTGAGTATTTTCCATTTGGTGGTGGAAGGAGAATTTGTCCAGCTTTCCAATGGAATGAAAAATGAAGAGCTAGTGTTGACAGAGGAGTTTGGAGTTGCAATGGCAAGAAATGGCGACCTTTACTTGATTCCCTTTATTTCTCATCCTTTGCTTGTAACATAA 729 0.3676 MKPKLEKLSQQVDRILGHIINDHREARSKRAIEGVAESEEDLIDVLLKFEDSNKDLDFYLTTDNIKAIILYVFAAAGSETAAIIINWAMTEMIKDPRVLKIAQAEVRDKINRRGIIDETTLGELKYLKAVIKESLRLHPSIPLLLPKECGQACEIDAWDIGRDPKYWTDPDKFYPERLLIVLLTTKEPTLSIFHLVVEGEFVQLSNGMKNEELVLTEEFGVAMARNGDLYLIPFISHPLLVT 242
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car05g01106 242 Pfam Cytochrome P450 3 177 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Car05g01106 242 Gene3D Cytochrome P450 1 191 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Car05g01106 242 PANTHER CYTOCHROME P450 FAMILY 71 PROTEIN 1 187 - -
Car05g01106 242 PANTHER CYTOCHROME P450 71B11-RELATED 1 187 - -
Car05g01106 242 PRINTS E-class P450 group I signature 128 146 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Car05g01106 242 PRINTS E-class P450 group I signature 156 180 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Car05g01106 242 PRINTS E-class P450 group I signature 64 81 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Car05g01106 242 SUPERFAMILY Cytochrome P450 4 177 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Car05g01106 242 PRINTS P450 superfamily signature 76 93 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Car05g01106 242 PRINTS P450 superfamily signature 129 140 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car05g01106 Car-Chr5 52893245 52894846 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car05g01106 4 179 Cytochrome P450 AT3G26230 41.667 6.11e-38 136
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car05g01106 - - lja:Lj0g3v0164489.1 258.455