Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car05g01105 ATGGATTCTCAATTTCTATATTTTGCATCAATTCTCACCCTTTTCATTTTTGTGTTTATGTCACACAAAATACTAACCAAGAAATCAAAATCAACTCCAAATTTACCACCAGGTCCATGGAAACTACCTATCATAGGAAACATACACAATCTTGTTGGTTCACTTCCCCATCATAGACTTAGAGAATTATCAACAAAATATGGTCCCTTAATGCATCTAAAGCTAGGAGAGATTTCTACTATTATAGTTTCATCAGCTGAATGTGCTAAACAAGTTATGAAAACTCATGATCTTATCTTTTCATCAAGGCCTCCAATTCAAGCTTCAACAATAATGAGTTATAATAATGTTGGTATTGCTTTTGCACCTTATGGTGATTATTGGAGACAACTTAGGAAAATTTGTACACTTGAGCTATTAAGTTCAAAAAGTGTTCAATCTTTTCAACCAATTAGAGATGAAGAGGTTACTAATCTCATTAAATGGATTACTTCAAAAGAAGGGTCATCAATCAATCTTACAAAAGAAGTTTTTTCAACAATATCTACAATCACTTCAAGAACAGCCTTTGGGAAAAAGTGTGAGGAAAATACAAAATTTATATCATTGGTAAGAGAAGCTGTCAAGGTTGCTGGAGGATTTAATTTGGGAGATTTGTACCCTTCTTATAAATGGCTTCAAAACATTTCTGGATTGAAGCCTAAGCTTGAAAAGTTGCATCAACAAGCTGATATTATAATGCAAAAGATTATTAATGAGCATAGAGAGGTTAATAAATTAAGGGCTAATGAAGATCAAGAAGTAGAAGAAGATCTTGTAGATGTGCTGTTGAAGCAGAACTGTTTAAGTGATGATAGTGTCAAAGCTGTGATCTTGGATGTGTATGGAGGAGGAAGTGAGACATCAGCTACTACCATAGCATGGGCAATGGCTGAGATGATTAAAAATCCAAGAATAATGGAGAAGGTACAAGCTGAGGTAAGAGAGGTCTTTGATAAGGAAAAAAACCTCAATGGAAGGGACATTGAGAAATTAACATATTTAAAGTATGTTGTGAAAGAGACATTGAGATTACACCCTCCAGCTCCATTATTGCTTCCAAGAGAATGTGGACAAGATTGTGAGATAAATGGCTATAATATACCTTTTAAAAGCAAAATCATAGTGAATGCTTGGGCAATTGGAAGAGATCCAAATTATTGGGTTGATCCGGAGATATTTTATCCTGAAAGATTCGTTGAAAGTTGTGTAGACTATAAGGGTAATAATTTTGAGTTTATTCCATTTGGTGCTGGAAGAAGAATGTGTCCGGGACTCACATTTGGTTTGATCAATGTTGAGTTTCCACTTGCAATGTTATTGTACCACTTTGATTGGAAGCTTCCCAATGGAGTTAAAAATGAAGATTTAGACATGAGTGAAACTTTTGGATCAGCTGTTACTAGAAAAGATGATTTATATCTTATTCCGATCACTTATCATCTTTAG 1488 0.3421 MDSQFLYFASILTLFIFVFMSHKILTKKSKSTPNLPPGPWKLPIIGNIHNLVGSLPHHRLRELSTKYGPLMHLKLGEISTIIVSSAECAKQVMKTHDLIFSSRPPIQASTIMSYNNVGIAFAPYGDYWRQLRKICTLELLSSKSVQSFQPIRDEEVTNLIKWITSKEGSSINLTKEVFSTISTITSRTAFGKKCEENTKFISLVREAVKVAGGFNLGDLYPSYKWLQNISGLKPKLEKLHQQADIIMQKIINEHREVNKLRANEDQEVEEDLVDVLLKQNCLSDDSVKAVILDVYGGGSETSATTIAWAMAEMIKNPRIMEKVQAEVREVFDKEKNLNGRDIEKLTYLKYVVKETLRLHPPAPLLLPRECGQDCEINGYNIPFKSKIIVNAWAIGRDPNYWVDPEIFYPERFVESCVDYKGNNFEFIPFGAGRRMCPGLTFGLINVEFPLAMLLYHFDWKLPNGVKNEDLDMSETFGSAVTRKDDLYLIPITYHL 495
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car05g01105 495 Gene3D Cytochrome P450 28 487 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Car05g01105 495 PANTHER CYTOCHROME P450 71D9 8 494 - -
Car05g01105 495 Pfam Cytochrome P450 36 477 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Car05g01105 495 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 429 438 IPR017972 GO:0005506|GO:0016705
Car05g01105 495 PRINTS E-class P450 group I signature 64 83 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Car05g01105 495 PRINTS E-class P450 group I signature 88 109 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Car05g01105 495 PRINTS E-class P450 group I signature 180 198 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Car05g01105 495 PRINTS E-class P450 group I signature 286 303 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Car05g01105 495 PRINTS E-class P450 group I signature 306 332 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Car05g01105 495 PRINTS E-class P450 group I signature 349 367 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Car05g01105 495 PRINTS E-class P450 group I signature 390 414 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Car05g01105 495 PRINTS E-class P450 group I signature 426 436 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Car05g01105 495 PRINTS E-class P450 group I signature 436 459 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Car05g01105 495 PANTHER CYTOCHROME P450 71B11-RELATED 8 494 - -
Car05g01105 495 SUPERFAMILY Cytochrome P450 36 490 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Car05g01105 495 PRINTS P450 superfamily signature 297 314 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Car05g01105 495 PRINTS P450 superfamily signature 350 361 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Car05g01105 495 PRINTS P450 superfamily signature 427 436 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car05g01105 Car-Chr5 52869879 52872115 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car05g01105 14 493 Cytochrome P450 AT3G26300 43.750 6.72e-147 428
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car05g01105 - K13267 gmx:100813216 733.791
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car05g01105 05 52869879 52872115 Car05g01105 05 52869879 52872115 ECH