Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car05g01099 ATGGAAGGGGGTGAAAATAGTAAAACTGAAAACCCTAATTGGGAAGAAGCAATGGTAAAGTATGAGAATGTTATGGCCTCAGGTACCAAATCTATGAAAAGAAAAGCTATGATTATGTTGGCACATTACTCTAAAAGAGTACCTGAACATGTATTAGTTACCACCATACCAATTCTCACTCAGATTCTTGGTGAAAACATTGCAAATGATTCTTTTCCTGATTTACTTCAAGAGACTGCTGCTTATTGCTTGAAGTGCATTGCTTGTAGAGGTGATGGTGCTTTGGTTAATGAAATGTGTGGACATGGTGTTACACATTCTTTGATAAGGTTATTGCCTTGTGCCGAGGGGAAGATGCAGAAAGTTCTGATAAAATTGTTGATGGTTGTTGTTAATTTTTGTAGTACAAGTAGGATAGTTGTTGGAGCTAATGGTGGGTTAGAAATTATTATCAGTTTGTTGAATTCTTGCAACAATGATGTTAGATTGTATTTGTTAGAGATTTTGAGTGCGTTGGCGCTTCGGAGGGAGATTAGGAAGGAACTCATTAGATTAGGAGCTCTTCATTTTATTGTAGAGGCTGTTGGTGTTGGCAACATGGTTTCTAGGGAGAGAGCTTGTCAATCAATTGGATTGCTTGGGGTTACGAGAGAAGCTAGGCGTACGCTTGTTGAATTGGGAGTTATACCGGTGCTTGTTGAGTTGTTTCGCAATGGAGATAATGCCACGAAACTTGTAGCTGGTAATACTCTTGGTGTGGTATCTGCTCATGGTTATGTTAGACAAGTTGCTGAAGCTAGGGCTATACCTCTTTATGCCGAGCTTCTTCAAGGATCTGATGCTTCTGGTAAGGAGATAGCTCAGGATGTGTTTTGTATATTGGCTGTTTCAGAGCCTAATTCTGTTGAAATTGTTGGTCACATGGTGAGAATTCTTAGAGAAGGTGATGATGAAGCTAAAGCAGCGGCTGCTGATGTGATTTGGGATCTGTCGGTATACAAGCACGCAACTTCTGTGGTTTGGGCTTCAGGTATGATACCTATCCTTGTTGAGCTTTTGGGGCATGGGAGTGAAGAAGTAAAGAAGAGTGTTTCTGGGGCATTTTCTCAGCTAAGCTATGTTGGAGCCGGTAGAATGGCCCTTGCTGAGGCTGGGGCTATTCCGATTCTCAATGACATGCTACATGACGACACTGAGGAACTAAAATATAATGCTGTTGAGGCTCTTTCCAATTTTCATGAAGATCCATTATACCATGATACAGTATCTGATAATGAGTGTTCAGCAGCTCATTTCAATCGCGAGTCATGTTTAATCGTCTTACAGGTGGCGGCCATGAAATTGTAA 1347 0.4091 MEGGENSKTENPNWEEAMVKYENVMASGTKSMKRKAMIMLAHYSKRVPEHVLVTTIPILTQILGENIANDSFPDLLQETAAYCLKCIACRGDGALVNEMCGHGVTHSLIRLLPCAEGKMQKVLIKLLMVVVNFCSTSRIVVGANGGLEIIISLLNSCNNDVRLYLLEILSALALRREIRKELIRLGALHFIVEAVGVGNMVSRERACQSIGLLGVTREARRTLVELGVIPVLVELFRNGDNATKLVAGNTLGVVSAHGYVRQVAEARAIPLYAELLQGSDASGKEIAQDVFCILAVSEPNSVEIVGHMVRILREGDDEAKAAAADVIWDLSVYKHATSVVWASGMIPILVELLGHGSEEVKKSVSGAFSQLSYVGAGRMALAEAGAIPILNDMLHDDTEELKYNAVEALSNFHEDPLYHDTVSDNECSAAHFNRESCLIVLQVAAMKL 448
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car05g01099 448 Pfam Armadillo/beta-catenin-like repeat 337 372 IPR000225 GO:0005515
Car05g01099 448 SMART arm_5 374 414 IPR000225 GO:0005515
Car05g01099 448 SMART arm_5 134 174 IPR000225 GO:0005515
Car05g01099 448 SMART arm_5 333 373 IPR000225 GO:0005515
Car05g01099 448 SMART arm_5 216 256 IPR000225 GO:0005515
Car05g01099 448 SMART arm_5 175 215 IPR000225 GO:0005515
Car05g01099 448 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 344 386 IPR000225 GO:0005515
Car05g01099 448 Gene3D - 260 426 IPR011989 -
Car05g01099 448 PANTHER U BOX DOMAIN-CONTAINING 3 425 - -
Car05g01099 448 SUPERFAMILY ARM repeat 56 413 IPR016024 -
Car05g01099 448 PANTHER U-BOX DOMAIN-CONTAINING PROTEIN 10-LIKE 3 425 - -
Car05g01099 448 Gene3D - 18 259 IPR011989 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car05g01099 263 398 U-box Gene Family AT1G23030 32.867 3.45e-10 60.1
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car05g01099 05 52749275 52753063 Car05g01099 05 52749275 52753063 ECH