Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car05g01098 ATGGCAGAAATGGCAGTGTCTTTTGCTATTGACCAACTGCTTCCGCTGTTAAGAGAAGAAGCCAAACTGATCAAAGGTGTTCACAAGGAATTTTCAGACATTAAAGATGAACTGGAAATCATCCAAGCCTTCCTTAAGGATGCTGATAAAAGAGCTGCAGCTAATGGAGACAACAACAGGGAAGAGATCAAAACATGGGTGAAACAAGTTAGGGAAGCAGCTTTCCGCATAGAAGATATCGTGGATGAGTATATGATCTATTTGGCACAGAAGCCTCGTCATCTTGGATGTGCAGCTTTACACCATAAGATTGGATCAAACAGTTCTAGAGGAAGCTGGAATGCGAAATGTCACCCCCTTCGAGAAGCTGCTCTTTACATCGAGGAAGCTGAAGTTGTGGGTTTTGAAAAAGAAACACAAAAGTTGATTGATTGGTTGGTAAAGGGAAGGGAAGAGCGCACCGTAGTTTCTGTGGTAGGAATGGGAGGGCAGGGTAAAACAACTCTAGCCAAGAAAGTTTATAATAGCAAGGATGTCATTGGACACTTTGACTGTCGTCTATGGATCATAGTGTCTCAATCTTATACTCCAGAAGGCTTGTTGAGGGACATTTTAAAACAAACAGGCGGAGATCCTTCTAAAATGGATCAAAGGTCGTTAACCACTGAAGTGAGAAACAACTTGAAGAAAAAGAGGTACGTTGTCGTGTTTGATGATGTTTGGAGTGAAGATTTTTGGGATCATATTCAATATGCTGTAATTGATAATAAAAATGGAAGTAAGATATTTATCACAACAAGGAACCTGGAAGTTGCGGAGTCTTGTAAAAAGTCTTCTTTCATTGAAGTGCTTGAGTTGCAACCTTTAACCGATAAAGAAGCTTTGGAGTTGTTCTATAAGAAGGCATTTAGCTTTGATGATGATGGGTGTTGTCCTAAAGAGCTCATTGATGTAGCTAATGAAATTGTTAAAAAATGTAAGGGTTTACCACTAGCAATTGTTACCATTGGTGGACTTTTGTCTACGAAAAAGAGAAATGTGTTTGAGTGGAACAAATTTAGTGAAAATCTAAGTTTAGAGCTAAATAAAGACAAAGGGATAAAAGAAATTTTAGGCTTAAGTTACGATGATTTGCCTTACCATCTAAAGTCATGTTTGCTGTATTTTGGAATATATCCAGAAGATTATGAAGTTAAATCGATGAGAATGATTCGACAGTGGATAGCTGAAGGGTTTGTGAAACAGGAAAGAGGGAAGAGTTTGGAAGAAGTTGCAGAAGGATATTTGACAGAATTGATCCATAGAAGCTTGGTGCAAGTATCTTTAATTAAATTTGATGGCAAAGCTAAAAGTTGTCGTGTTCATGATCTAACACGGGAGATGATCATTGAAAAATTTGAGGATTTAAATTTTTGCAAGCATATTATTAGTGAAGATGATCATTCATCCTCTAGTGGAATAATTCGGCGCCTATCAATAAGAACCATTTCTGATGATCTTGTGGTGCATATTGAAAACTCGCATGTTCGGTCAGTGCTTGTTTTTGGAGATTATGAAAATATCAGGTCACAGCATGTTTTTGGAGATAATAAAAATATCCAACTAGCCATAGGCTTTACGAGGAGAATTCTTATGAAATACAGGTTGTTGAAGGTTCTTGATTTTGAATTTGCACCCTTGTTTAATGTTTCTAAAATGTTGGGAAGTTTTGTCCACTTGAAATATTTAAGCTTCAAGAATGGATCTCTAAATGAACTCCCAAAATCCATTGGCATGCTCCAGAACCTAGAGACTTTGAATGTAAGGCATACTAATGTTTATGAGTTGCCAAAGGAGATTAGCAAGCTTAGAAAGCTACGACATCTAATCGGCTCTGAGCTATCTTTGATTCAATTGAAGGATGGTATTGGAGAGATGGAATTGCTACAAACACTACGTGATGTTGATTTAGGTATGGATGGAGTTGTAGAGGTAATTATAGGGTTAAGAAAGCTGAAGCACATAAGGGACTTGGAGTTGCAAAATGTTCAGGGAGAACATGGGAGCATTCTTTCTTCTTCAATCAATGAAATGAAACACTTAAAGAAACTAAGTGTCGAAGCAAAAACATCTCATGTACTTGATTTGCATTTGATTCCAACACGACCTATGCTTCAAAAACTTACTCTATTTGGAAAGTTACAAAAGTTGCCAGAGTGGATTCCAGAGTTTCAAAATCTTCTTGTGTTGAGTTTGTATTATTCCAATTTAACTAATGATCCAATGCAATCACTGAAAAAATTGCAACACTTGTCGATCCTCTATATATGCGGTATAGCTTATAAAGGTTTAAGTTTTCATTTTCAAGATGGATGGTTTCAAAAACTAAAAGAACTGCACATTGTTGGTATCGATGAATTGAGATATATTATTATCGACAAAGGAGCACTCCCTTTTCTCAAAAAACTAAATTTAATGTGGCTCTGTGGTATGGAGCGTATGCCCACTGGCATACAATACTTAGAGAAGCTTGAAGTTCTCTATATGAATTGTATGAGAGTTGGATTTGTGAAGCAGAAATCATGTTTTATCACATCCGGGAGAAAAAGGTGTTTGGCTTCAATTTCATGTGCAATGGCAAATTTAGATTCTCCACAGGGACTTTGA 2646 0.37 MAEMAVSFAIDQLLPLLREEAKLIKGVHKEFSDIKDELEIIQAFLKDADKRAAANGDNNREEIKTWVKQVREAAFRIEDIVDEYMIYLAQKPRHLGCAALHHKIGSNSSRGSWNAKCHPLREAALYIEEAEVVGFEKETQKLIDWLVKGREERTVVSVVGMGGQGKTTLAKKVYNSKDVIGHFDCRLWIIVSQSYTPEGLLRDILKQTGGDPSKMDQRSLTTEVRNNLKKKRYVVVFDDVWSEDFWDHIQYAVIDNKNGSKIFITTRNLEVAESCKKSSFIEVLELQPLTDKEALELFYKKAFSFDDDGCCPKELIDVANEIVKKCKGLPLAIVTIGGLLSTKKRNVFEWNKFSENLSLELNKDKGIKEILGLSYDDLPYHLKSCLLYFGIYPEDYEVKSMRMIRQWIAEGFVKQERGKSLEEVAEGYLTELIHRSLVQVSLIKFDGKAKSCRVHDLTREMIIEKFEDLNFCKHIISEDDHSSSSGIIRRLSIRTISDDLVVHIENSHVRSVLVFGDYENIRSQHVFGDNKNIQLAIGFTRRILMKYRLLKVLDFEFAPLFNVSKMLGSFVHLKYLSFKNGSLNELPKSIGMLQNLETLNVRHTNVYELPKEISKLRKLRHLIGSELSLIQLKDGIGEMELLQTLRDVDLGMDGVVEVIIGLRKLKHIRDLELQNVQGEHGSILSSSINEMKHLKKLSVEAKTSHVLDLHLIPTRPMLQKLTLFGKLQKLPEWIPEFQNLLVLSLYYSNLTNDPMQSLKKLQHLSILYICGIAYKGLSFHFQDGWFQKLKELHIVGIDELRYIIIDKGALPFLKKLNLMWLCGMERMPTGIQYLEKLEVLYMNCMRVGFVKQKSCFITSGRKRCLASISCAMANLDSPQGL 881
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car05g01098 881 PANTHER DISEASE RESISTANCE PROTEIN RP 26 843 IPR044974 GO:0006952
Car05g01098 881 PRINTS Disease resistance protein signature 591 607 - -
Car05g01098 881 PRINTS Disease resistance protein signature 227 241 - -
Car05g01098 881 PRINTS Disease resistance protein signature 326 340 - -
Car05g01098 881 PRINTS Disease resistance protein signature 155 170 - -
Car05g01098 881 CDD RX-CC_like 2 97 IPR038005 -
Car05g01098 881 Gene3D Ribonuclease Inhibitor 534 873 IPR032675 -
Car05g01098 881 Pfam NB-ARC domain 136 376 IPR002182 GO:0043531
Car05g01098 881 Gene3D - 4 113 - -
Car05g01098 881 Gene3D - 116 283 IPR027417 -
Car05g01098 881 Gene3D - 381 465 IPR036388 -
Car05g01098 881 PANTHER - 26 843 - -
Car05g01098 881 Pfam Rx N-terminal domain 5 92 IPR041118 -
Car05g01098 881 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 118 389 IPR027417 -
Car05g01098 881 SUPERFAMILY L domain-like 453 846 - -
Car05g01098 881 Gene3D - 288 379 IPR042197 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car05g01098 Car-Chr5 52730283 52733542 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car05g01098 156 345 WRKY Transcription Factor Family AT5G45050 33.166 1.08e-10 63.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car05g01098 K13457 - gmx:100819372 835.099