Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car05g01095 ATGCAAACATCTCAGAAACATGAAATTTCTTACGGTTCTAGCAGGTTCTACATCGAACCTGTGCAGAATCTGGAGTCATATGGCATACCGTCAAGTGAGAATATAGACAATTGTTCATCCTCCGATAACAGCAGCCAAACATTCTATCCTTCTCATCAGACTTTAGAGCCATATAGCACCCTTGAATCTGCTTCAACAAGCAACAGTTTTCCTTACCAAAATTCTCCTTCTACTATCAGTTTCTCATCTAACAATAGCCCAGTGTCAAAGCTAGAGTCAAAATCATACGTGCTAAGGCCGGAACGTTCTCTTGAATTTGTTCACGGTTCACATGAGGATGATGACTCCTACTTGGCACATGACCTTGATGACCTGAGGCATAAGATAAGAGAACTGGAATCTGTTATGCTTGGACCTAATGATGATATGCTAGATATATTTGATAATGAAGTTCAAGAAGAATCTGCTTCATTCTTATTAGAGGCGGAGAAGTGGAAGAAAAACATGGAGATGGTATCTAGAGGTGACTTGAAAGAGATGCTTTATGCTTGTGCTAAAGCAGTTGCTGTGAATGATATCGAGACAATTGAATGGATGGTGACTGAGTTGCGCAAAATCGTATCCATATCTGGCAGCCCGATCGAACGATTGGGAGCGTATGTGTTGGAGGCTCTTGTTTCGAGGATGGCATCTTCAGGAAGCACAATCTACAAATCATTAAAATGTAGCGAGCCGACCGGTAATGAACTACTTTCCTACATGCATGTACTTTATGAAATATGTCCATACTTTAAGTTTGGATATATGTCTGCAAATGGAGCTATTGCTGAAGCTATGAAGGACGAAAATGAAGTCCACATAATTGATTTTCAAATTAGCCAAGGAACTCAGTGGGTTAGCCTGATTCAAGCTCTTGCTCGCCGGCCTGGAGGACCCCCAAGGATCAGAATTACAGGTGTTGATGATTCCTTTTCGGCTTATGCTCGCGGTGGCGGGGTTGATGTAGTTGGGGAAAGATTATCAACGCTTGCACAGTCGTGTCATGTACCGTTTGAGTTCCATGCTGTTAGAGTTTCTGCTTCTGAGGTGCAACTCGAAGACTTTGAACTTCGACCTGACGAAGCTGTGGCGGTGAATTTTGCCATTATGCTTCACCACGTGCCAGACGAAAGTGTGAACGTTCATAATCATCGTGACAGGTTGTTGCGATTGGTTAAGCACTTGTCTCCTAAGGTGGTGACTCTTGTTGAGCAAGAATTCAACACCAATAATGCTCCATTCTTGCAGCGTTTTGTTGAGACAATGAACTACTACTCGGCTATTTATGAATCGATTGATGTTGTTCTTCCAAGGGATCACAAAGAGAGGATTAATGTGGAACAACATTGTTTGGCTCGAGAAGTTGTCAACTTGATAGCTTGTGAAGGTGAAGAACGAGTGGAACGTCACGAGCTTCTGAGTAAGTGGAGTATGCGTTTCGCAATGGCTGGATTTACGCCTTATCCGTTGAGCTCCTTCATCAATTCTTCAATCAAGGATCTTCTCGAGAGCTACCGAGGACATTACACTCTAGAAGAGAGAGATGGTGCGCTTTATCTTGGTTGGATGAATCAAGTTCTTATTGCTTCTTGTGCTTGGAGATGA 1644 0.427 MQTSQKHEISYGSSRFYIEPVQNLESYGIPSSENIDNCSSSDNSSQTFYPSHQTLEPYSTLESASTSNSFPYQNSPSTISFSSNNSPVSKLESKSYVLRPERSLEFVHGSHEDDDSYLAHDLDDLRHKIRELESVMLGPNDDMLDIFDNEVQEESASFLLEAEKWKKNMEMVSRGDLKEMLYACAKAVAVNDIETIEWMVTELRKIVSISGSPIERLGAYVLEALVSRMASSGSTIYKSLKCSEPTGNELLSYMHVLYEICPYFKFGYMSANGAIAEAMKDENEVHIIDFQISQGTQWVSLIQALARRPGGPPRIRITGVDDSFSAYARGGGVDVVGERLSTLAQSCHVPFEFHAVRVSASEVQLEDFELRPDEAVAVNFAIMLHHVPDESVNVHNHRDRLLRLVKHLSPKVVTLVEQEFNTNNAPFLQRFVETMNYYSAIYESIDVVLPRDHKERINVEQHCLAREVVNLIACEGEERVERHELLSKWSMRFAMAGFTPYPLSSFINSSIKDLLESYRGHYTLEERDGALYLGWMNQVLIASCAWR 547
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car05g01095 547 ProSiteProfiles GRAS family profile. 168 547 IPR005202 -
Car05g01095 547 Pfam GRAS domain family 177 547 IPR005202 -
Car05g01095 547 PANTHER GRAS FAMILY TRANSCRIPTION FACTOR 22 546 - -
Car05g01095 547 MobiDBLite consensus disorder prediction 28 88 - -
Car05g01095 547 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 22 546 IPR005202 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car05g01095 Car-Chr5 52668803 52672085 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car05g01095 1 547 GRAS Transcription Factor Family AT1G50600 55.535 0.0 603
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Car05g01095 GRAS 1.6e-132 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car05g01095 - - gmx:100785400 869.381
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car05g01095 05 52668803 52672085 Car05g01095 05 52668803 52672085 ECH
Car05g01095 05 52668803 52672085 Car02g02106 02 51470999 51474270 PCT