Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car05g01092 ATGCCAAGTATTAAACCAAATATTCCATCAGAAAAAGACTCAGAGCTATTTGTTGAAACTGATCCAACAGGAAGATATGGAAGATACAACGAACTTCTTGGATCAGGTTCATGTAAAAAAGTGTACAGAGCATTTGATCAAAAAGAAGGAATAGAAGTTGCTTGGAATCAAGTTAAACTAAGAAACTTCACTAATGACCCTGCAATGGTTGGAAGACTTTACTCTGAAGTTAGATTACTTAAAAGTATGAAAAACAAAAACATCATTGCTCTTTATAATTTTTGGAGGGATGAAGAACATAACACACTCAATTTCATCACTGAGGTTTGTACTAGTGGAAATTTGAGAGAGTATAGAAAGAAACATAAGCATGTTAATATCAAGGCTTTGAAGAAGTGGTCTAAGCAGATTTTGGAAGGGTTGAATTATTTGCATATGCATGATCCTTGTATCATTCATAGAGACCTCAATTGTAGCAATGTCTTTGTCAATGGAAACACTGGCCAGGTTAAGATTGGTGACTTAGGTTTGGCAGCAATTGTGGGAAAGAACCATTCAGCACATTCAGTTTTAGGGACACCAGAATTTATGGCACCTGAATTATATGAAGAGAACTACAATGAAATGGTGGACATATACTCATTTGGAATGTGTGTGTTAGAGATGGTGACATTAGAGATTCCTTATAATGAATGTGACAATGTTGTAAAAATATACAAGAAAGTTTCTTCAGGTGTAAGGCCTCAATCATTGGACAAGATTAAAGATCCAGAGGTTAAAGCTTTCATTGAAAAGTGTCTTGCACAACCAAGGGCTAGACCTTCTGCTAAAGAATTGCTCAAAGATCCTTTCTTtgatgtgttagatgatgatgaaaatgatgaCATTGTTGAGTTACTTATTTATTGA 909 0.3388 MPSIKPNIPSEKDSELFVETDPTGRYGRYNELLGSGSCKKVYRAFDQKEGIEVAWNQVKLRNFTNDPAMVGRLYSEVRLLKSMKNKNIIALYNFWRDEEHNTLNFITEVCTSGNLREYRKKHKHVNIKALKKWSKQILEGLNYLHMHDPCIIHRDLNCSNVFVNGNTGQVKIGDLGLAAIVGKNHSAHSVLGTPEFMAPELYEENYNEMVDIYSFGMCVLEMVTLEIPYNECDNVVKIYKKVSSGVRPQSLDKIKDPEVKAFIEKCLAQPRARPSAKELLKDPFFDVLDDDENDDIVELLIY 302
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car05g01092 302 PANTHER SERINE/THREONINE-PROTEIN KINASE WNK WITH NO LYSINE -RELATED 6 295 - -
Car05g01092 302 Gene3D Transferase(Phosphotransferase) domain 1 110 289 - -
Car05g01092 302 Pfam Protein kinase domain 30 285 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car05g01092 302 PANTHER SERINE/THREONINE-KINASE WNK11-LIKE PROTEIN 6 295 - -
Car05g01092 302 CDD STKc_WNK 25 285 - -
Car05g01092 302 SUPERFAMILY Protein kinase-like (PK-like) 22 286 IPR011009 -
Car05g01092 302 Gene3D Phosphorylase Kinase; domain 1 10 108 - -
Car05g01092 302 ProSiteProfiles Protein kinase domain profile. 27 285 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car05g01092 Car-Chr5 52612309 52614421 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car05g01092 11 286 MAP Kinase Kinase Kinase AT5G55560 81.159 3.93e-177 490
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK WNK_NRBP Car05g01092 Pkinase 2.7e-52 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car05g01092 K08867 - gmx:100818126 503.056
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car05g01092 05 52612309 52614421 Car05g01092 05 52612309 52614421 ECH
Car05g01092 05 52612309 52614421 Car02g02102 02 51439874 51442386 PCT