Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car05g01071 ATGGGTTTTGCAGTTAATTTGACATCTGAAGTGGAGAAGAATTTGGCTCATGATCATGCACAAGTTGTGCCTATGACACTCTTTGTCGCTGTTCTTTGCCTCTGTTTGCTTATTGGTCACTTGCTTGAAGAAAGTCGATGGATTAATGAATCCATTGTCGCCATTTTTGTTGGATGCATTGCTGGAATAATACTCTTATTAATCACTAAGGGAAANNNNNNNNNNNNAGAGTTCTCATATCCTTACATTTAA 252 0.3571 MGFAVNLTSEVEKNLAHDHAQVVPMTLFVAVLCLCLLIGHLLEESRWINESIVAIFVGCIAGIILLLITKGXXXXXEFSYPYI 83
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car05g01071 83 PANTHER SODIUM/HYDROGEN EXCHANGER 11 72 - -
Car05g01071 83 PANTHER SODIUM/HYDROGEN EXCHANGER 11 72 IPR018422 GO:0006812|GO:0015299|GO:0016021
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car05g01071 Car-Chr5 52291201 52291616 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car05g01071 4 71 Antiporters AT5G55470 57.353 1.59e-23 90.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car05g01071 - - gmx:100813332 86.6557