Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car05g01070 ATGCTATTCGGTGTGATTGGGGTTTTTATTTCGGCGTCTATTATTACAGGCGGCAGCTGGTGGCTGTTCCCCAAGTTGAACTTCCTTGATCTGACGGCACGAGATTATCTTGCTTTAGGAACAATTTTCTCCTCGACCGACACAGTTTGTACACTACAGGTTCTCCATCAAGATGAAACTCCATTACTATACAGCCTAGTTTTTGGAGAAGGAGTGGTAAATGATGCAACATCAGTTGTACTCTTCAATGCAGTGCAAAAGGTCGATGTTTCAAGACTCAATGGCAATACGTTGCGTGTTGTCGGAGATTTCTTGTATCTATTCTCAACAAGCACTGCTCTTGGTGTCATAGCTGGACTTGTGACAGCATATATCTTGAAAGCCTTAAGTTTTGGAAGACATTCAAGTGTTCGTGAAATTTCATTGATGATGTTAATGGCATACCTATCCTACATGTTGGCAGAGCTACTTGAACTAAGTGGAATCCTCACTGTTTTCTTTTGTGGAATATCAATGTCACATTATGCATGGCATAATGTGACTGAAATTTCAAGAATCACAACAAGACATGTATTTGCAACAATGTCATTTATTGCGGAAACCTTCATATTTCTTTACGTGGGTATGGATGCCCTTGACATTGAAAAGTGGAGGATGACTCAATTAAGATTTGGAAATTTGATAGGAATATACAGTGGCTTAATCTTTTTAATATTGCTTGGGAGGGCTGCATTTGTTTTCCCCCTCTCTGCATTTGCTAATTATATGAATAGGCACGCTGAACAAACACCTAGTATCACAATCAAACACCAGATAATCATTTGGTGGGCTGGACTAATGAGGGGAGCAGTCTCCATTGCTTTGGCTTTCAAACAGTTCACGTTCTCTGGTGTTACTTTGGATCCAGTTAATGCGACAATGATTACCAACACCATTATTGTTGTCCTTTTCACCACGCTGGTGTTTGGATGTCTCACAAAACCACTTATTAGATATCTTCTTCCCCACCATGCAACAAGGGTAAACATCAGCCATGAAGAATCAGGAACACCAGTCGAGGACTTGAACCTACCTTTGCTATCCTTTGAAGAGTCGGCAGCAACCAACATTAGTCGCGCAAAGGAAAGTCTATCCATGTTAATAGAAAGTCCTGTGTACACCATACATTACTATTGGAGGAAGTTTGATGATTCCTACATGAGACCGATATTTGGTGGTCCCCGCAGCGACGATTCAGAGTGCTAG 1245 0.4112 MLFGVIGVFISASIITGGSWWLFPKLNFLDLTARDYLALGTIFSSTDTVCTLQVLHQDETPLLYSLVFGEGVVNDATSVVLFNAVQKVDVSRLNGNTLRVVGDFLYLFSTSTALGVIAGLVTAYILKALSFGRHSSVREISLMMLMAYLSYMLAELLELSGILTVFFCGISMSHYAWHNVTEISRITTRHVFATMSFIAETFIFLYVGMDALDIEKWRMTQLRFGNLIGIYSGLIFLILLGRAAFVFPLSAFANYMNRHAEQTPSITIKHQIIIWWAGLMRGAVSIALAFKQFTFSGVTLDPVNATMITNTIIVVLFTTLVFGCLTKPLIRYLLPHHATRVNISHEESGTPVEDLNLPLLSFEESAATNISRAKESLSMLIESPVYTIHYYWRKFDDSYMRPIFGGPRSDDSEC 414
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car05g01070 414 PANTHER SODIUM/HYDROGEN EXCHANGER 1 412 - -
Car05g01070 414 Gene3D - 32 84 - -
Car05g01070 414 PANTHER SODIUM/HYDROGEN EXCHANGER 1 412 IPR018422 GO:0006812|GO:0015299|GO:0016021
Car05g01070 414 Pfam Sodium/hydrogen exchanger family 2 330 IPR006153 GO:0006812|GO:0015299|GO:0016021|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car05g01070 Car-Chr5 52287685 52291021 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car05g01070 1 414 Antiporters AT5G55470 71.838 0.0 613
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car05g01070 - - gmx:100813332 686.026
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car05g01070 05 52287685 52291021 Car05g01070 05 52287685 52291021 ECH