Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car05g01058 ATGAAACTCGCTGATGATATCAGTGGCATGATTTCTGAACATACATCATTTCCTACATCTGGACCAGAAACCCAGCGTCACGCATCTGCTATAAGAAGGAAGATCACAATATTGGGAACCAGACTAGATAGCTTGCAATCCCTTTTGTCAAAGCTCCCTGTAAAGTCTGAAAAGGAGATGAATCGTCGCAAGGACAACCTTGCAAATTTGAGGTCAAAAGTTAACCAAATGGCTTCAACATTGAACATGTCAAACTTTGCAAATAGGGATAGTTTGCTTGGGCCAGAAATTAAACCAGATGCAATGAGCAGAACCGTTGGTTTGGATAACAGTGGACTTGTTGGTCTACAACGGCAAGTCATGAAAGCAGAGCAAGATGAGGGCCTTGAGAAATTGGAGGAGACTGTATTAAGTACGAAACATATTGCGTTGGCTGTAAATGAAGAGCTGACTCTACACACTAGACTCATTGATGACTTGGATGAACATGTTGATGTTACAGATTCTCGGCTGAGGCGGGTGCAGAAGAACTTAGCAATTTTAAACAAACGTACAAAGGGTGGTTGCTCATGCTTGTGCATGCTATTATCAGTGATTGGTATAGTGGTTTTGGTTGTTGTCATATGGCTTCTGGTCAAATATTTGTAG 648 0.4151 MKLADDISGMISEHTSFPTSGPETQRHASAIRRKITILGTRLDSLQSLLSKLPVKSEKEMNRRKDNLANLRSKVNQMASTLNMSNFANRDSLLGPEIKPDAMSRTVGLDNSGLVGLQRQVMKAEQDEGLEKLEETVLSTKHIALAVNEELTLHTRLIDDLDEHVDVTDSRLRRVQKNLAILNKRTKGGCSCLCMLLSVIGIVVLVVVIWLLVKYL 215
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car05g01058 215 SMART tSNARE_6 114 181 IPR000727 -
Car05g01058 215 MobiDBLite consensus disorder prediction 1 25 - -
Car05g01058 215 CDD SNARE_Qc 122 179 - -
Car05g01058 215 PANTHER TARGET SNARE COILED-COIL DOMAIN-CONTAINING PROTEIN-RELATED 1 209 - -
Car05g01058 215 ProSiteProfiles t-SNARE coiled-coil homology domain profile. 119 181 IPR000727 -
Car05g01058 215 Gene3D - 123 183 - -
Car05g01058 215 PANTHER SYNTAXIN 1 209 IPR045242 -
Car05g01058 215 Pfam SNARE domain 156 207 IPR000727 -
Car05g01058 215 SUPERFAMILY SNARE fusion complex 117 180 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car05g01058 Car-Chr5 52073021 52074743 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car05g01058 1 215 SNARE and Associated Proteins AT1G16240 71.560 2.10e-110 314
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car05g01058 K08503 - gmx:100799465 345.125
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car05g01058 05 52073021 52074743 Car05g01058 05 52073021 52074743 ECH
Car05g01058 05 52073021 52074743 Car02g02082 02 51217137 51220262 PCT