Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car05g01046 ATGGGTAGGGGAGGCGTTACCACCGCGGCGGCGGCGGTTGAACCCGGTTCAAACCCGGTTTTTTTCAAAGAGCCGAGATACAGAGGCGTTAGGAAAAGACCGTGGGGCCGGTTCGCTGCTGAAATCAGAGACCCTTTGAAGAAAGCTAGAGTTTGGCTTGGAACCTTCGACACCGCTGAAGAAGCGGCGCGTGCATACGACACCGCCGCCAGAAACCTCCGGGGACCTAAGGCCAAAACTAATTTTCCTCTTTCTCCACCTTTTTACCATAATCTTGAAGCCGGAGATCCATTTTCCGATCAACGTTTCTATGCCGGCGCCGTTGCCGGCGATGGGTTTCAGGATCATCGGAGACCAACATCAAGCGGTATGAGCAGCACCGTGGAGTCTTTCAGCGGTCCACGTCCTGCCGGAACTTTAGCGCCGCCGTCGGTCGTCACCGGAAGAAGATATCCTAGGACACCACCGGTGGCTCCTGAGGACTGCCGTAGCGACTGCGACTCCTCGTCATCGGTGGTTGATGACGGTGACGGTGACAACGTGGCTTCGTCGGTGATGCTTTCGTTTCAACGCCAGCCGCTGCCGTTTGATCTCAACGCACCGCCGTTGGATGATGCTGACGTGGCAATCGGTGGTGGTTGGGAAGAAACTTTGTTAGGTAAGGGATGCATATGGTGA 678 0.559 MGRGGVTTAAAAVEPGSNPVFFKEPRYRGVRKRPWGRFAAEIRDPLKKARVWLGTFDTAEEAARAYDTAARNLRGPKAKTNFPLSPPFYHNLEAGDPFSDQRFYAGAVAGDGFQDHRRPTSSGMSSTVESFSGPRPAGTLAPPSVVTGRRYPRTPPVAPEDCRSDCDSSSSVVDDGDGDNVASSVMLSFQRQPLPFDLNAPPLDDADVAIGGGWEETLLGKGCIW 225
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car05g01046 225 CDD AP2 25 85 IPR001471 GO:0003700|GO:0006355
Car05g01046 225 Gene3D AP2/ERF domain 26 85 IPR036955 GO:0003700|GO:0006355
Car05g01046 225 SUPERFAMILY DNA-binding domain 26 85 IPR016177 GO:0003677
Car05g01046 225 MobiDBLite consensus disorder prediction 114 179 - -
Car05g01046 225 MobiDBLite consensus disorder prediction 118 133 - -
Car05g01046 225 SMART rav1_2 26 89 IPR001471 GO:0003700|GO:0006355
Car05g01046 225 MobiDBLite consensus disorder prediction 164 179 - -
Car05g01046 225 PANTHER ETHYLENE RESPONSE FACTOR 1 195 - -
Car05g01046 225 Pfam AP2 domain 25 75 IPR001471 GO:0003700|GO:0006355
Car05g01046 225 PRINTS Ethylene responsive element binding protein signature 27 38 IPR001471 GO:0003700|GO:0006355
Car05g01046 225 PRINTS Ethylene responsive element binding protein signature 49 65 IPR001471 GO:0003700|GO:0006355
Car05g01046 225 ProSiteProfiles AP2/ERF domain profile. 26 83 IPR001471 GO:0003700|GO:0006355
Car05g01046 225 PANTHER AP2 DOMAIN CLASS TRANSCRIPTION FACTOR 1 195 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car05g01046 Car-Chr5 51747009 51748409 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car05g01046 23 212 AP2-EREBP Transcription Factor Family AT3G20310 55.300 1.82e-49 160
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Car05g01046 AP2 1.7e-15 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car05g01046 K09286 - gmx:100782025 289.271
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car05g01046 05 51747009 51748409 Car05g01046 05 51747009 51748409 ECH