Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car05g01036 ATGGCTAAATATTTGGCGGGACCAGTAATTCGCGAAGTACAATACTTTCTTTGTGTAAATAAAGTAATGAATGATCTTGAGAATGAAAAGGAGGTGTTGGCATCCGAGAGAGACAACTTGCTAATTCGTGTTGCACAAGCAAAGGAGAGAACAGAAGTAATTGAAAAACCAGTGGAGAAGTGGCTGAATGATGTAGAAAATCTCTTAAGAGCGGTGGAGGATCTTGTTCAGAGGATGGAGACTGACAACAATTGCTTTCAAGGATGGTTTCCAACATGTAGGAGGTATCTTTTGTGCAAGCAAATGGTACAAGAGATATCAACAATAGGGAAACTGAAAGGCAAAAGCAATGATATTCAACCATTTTCTCACCGTGCTCAGCTACCAGGTATTCAGTATCATTCATCCGAAGACTTCATTTATTTTGAATCTACAAAATTGGCTTATAATGAACTCATGGAGGCACTTAAGGATGATTGTATCTCTATAATAGGAGTGTATGGACTAGGTGGATGTGGAAAAACAACCCTTGTAACAGAAGTTGGCAAGAAGTCTGAAGAATTGGATATGTTTGATAAGGTTATATCAATCACAGTGTCTCGAACTCCAAACAATAGAGGCATTCAGGGAAAAATTGCAGATATGTTAAACTTGAAATTGATGGAAGAAAGTGAAGAAGGAAGAGCACAACGTATATGGTTGCGTTTAAAAGATAATAAGCGAATTCTTCTAATACTAGACGATCTGTGGAGAGAGTTTCATTTGAAAGATATAGGGATTCGCTTAGACAATGTTAATAGAAGCACATGGAAAATCCTTGTAACCACTCGTAGAGAGCATGTTTGTACTTTAATGGACTGTCAAAAAAATATTCATTTGGGGCTCTTGTCTGAAGATGAATCTTGGACTTTATTCCGAAAGTTTGCAAGAATTGATGACGAATATTCTGAGTTATTGGATAGTGTGCCACGGAGAATCTGCAATGAATGTAAGGGACTTCCCATAACAATCAAAACTATAGGGTCATCATTAAAAGGAAGGCAAGAAATCGAGTGGCAGCAAGCATTTGATATGTTGAGGGATTCAAAGGCATCCAATGATGAAGATACATTGATGCCTACTTTAAATTGCTTTAAATTTAGCTATGATTATTTGCAAAGGCCGGAAGCGCAACGGCTCTTTCTGATGTGTTCTCTTTTTCCAGAAGACTATCACATCCCAATAGAAGATTTGATGAGGTATGCAATTGGACAAGGTGTGGAAAGAACGCACTCATTGCAATCAACAAGGAGCTTGATCCAAGCACACATAAATAAACTTTTGGATTCTTGCTTGCTGATGCCTGGTTCTGTGAAGATGCATGACATGGTTCGCGATGCAGCCTTATGGATCGCAAATAGATCAGAGAATTGTAAAATCTTGGTAAATCTTGACGAACCACTTAGCATTGCGGCTGAGAATAACAAAATAAGTGACTGTTTTGCAGTATCCTCATGGTGGTACAATGAAAGTCCATCTTTTTGTCAATTGCATGCTCCAAATCTTAAAATGCTATTGCTAAATATAGTTGGTCATAGATCATGGAATTCCCTAGATTTATCACATTTAATATTTGAAGGAATACAAGGACTTGAGGTTTTATCTCTAACCATTGACTACAAAATAGTACCATTATCATTTCCTCCATCAATCCAATTGTTGACAAATGTTCGAACTCTACGCTTAAATGGATTGAAGTTTGGTGACATTTCTTTCATAGGAAGCTTAACAAGACTTGAGGTTCTTGACTTGCGACGTTGTGAGTTCGATGAACTTCCTACCAAAATAGGAAAACTCAAAAGCCTGAAGCTGCTAGATCTGTCAGAATGTCATATTTTTGAAAACAACTACAATGGAGCAATAGGGAAATGTTCAAATCTAGAGGAGTTATATGCTTCAGCATGCTACCCAGAAGAGTATGTTTATGAGATCATTCTGGACATTGGTGTTCTCCCAAATCTACAAAGATTTGTACTTAACGACCCAATCGTTCGGGAAAGAACAAGAGTTCTACAATTGAATGATTTTGATATCTCAAAGTTGAGGACAACTAAAAAGATTTTTTTACAAATAGCGGAAATTGTTGTTTTGAGAGGCCTCCATGGAGAATGTAAAAATATCATTCCAAATATGGTTGAAGTTGTGGGAGGCATGAATAATTTGTCTACTCTATGTTTTGTTGACTGCCAAGAAATTGAATGCATCCTTGATAAAACTTCTGATTCCAAGGTAGATGATTTAATTCCGATGTTGGTCGAGTTACGCCTTCAAATTATGAGAAACTTGAAAGGATTGTGTCAAGGTCCAACTTTGCAAGTGCTACCCTTCTTTGAGAAACTAGAAATACTTGAATTACGATACTGTCCACAGTTACACAACATTTTTCCATTGGAATGTAAGTTACATAATCTTAAGTCCCTCAATTTATCTTATAGTAGGTCCAGTGAAGTACTCTTCCCTTTATCTGTTGCTCAAAGTTTGTTACAACTAGAAAAGCTAATAGTGGAGGGTTGCGACGAATTGAAGCATATAATATTGTGTGATAGAGAGCATGACTTTAATGCAAGAACGGAAATAGTTCAAGCACAAAGGGATTCTCATTTTCTGATGCCTTGTTTAAGGGAAGTTAAAATTCATGATTGTTGGAAGTTGGAGTCTATATTCCCAATCTGTTATGTTGAAGGACTTTCACAACTACAAATGATAGATGTATGGAATGTTCCTCAGCTGGAATATGTATTTGATGAATGTTATCATGCATATCAACCATTCCAGGACAACATCTTTCTTCCTAATTTAGAAGTTCTCAAACTTTGTAATCTTCACAATCTCTTTGGTATGTTTCCCTTAGACTACTCCCAAGTAGGGTGGCCATATGAGTCTCTGAGGAAGCTAACTGTGCAGCATTGTTCAAGATTTTCAAGATTGTGGCTTGATGTCATGGTTGGATCTTTTCCAATACACCATCTTCTGAATGATACCAATCCCTCAAAACTGCAAGAACTAGTTGTAAGTGGTATACATCATTTGTCCATCATATTATGGAACCTACCTATCAGCAGTCTCCTATATCTTCAATATGTACAAGTGAGTAATTGTGAAAATTTGAAATGTTTGTTCTCCATGGAAAAACATAGTAGCCTACCAGAGTTAATGTCCCTCCGTGTCTACGACTGCCAAAAGTTGGAACAAATCTTCGAAGCAAATGAAGAACATCTGCAGCTTCCTAATATGGAAGTATATTTTCCAAAGCTAAAACATATAGAAGTCCAAAACTGCAACAATTTGAAAAGTCTTTTCCCTGTTGCTATGGTTAGAATGCTTCCACAATTAAGCACGCTTCGAATATCAAAAGCTAATCAACTGGAAGAGGTTTTTAAACGTGGTCCTGGAGATGATATTATCAATCAAATGGAAGTTGTACTTCCAAACTTATCAGACATTACATTGGATGATCTACCGAGTTTTATTGATATATTCCACACTAGCAAGTTATATGTCGTTAAACCTCTAAAACTCTGCATATATAAATGCCCCAAAGCTTCTCTAAATTTGAGAAACAAATTCAGGATGAAACTTGAAGAAACAGCAGATGAGATGATGAAGCTTCTCTCTTCATGA 3660 0.3678 MAKYLAGPVIREVQYFLCVNKVMNDLENEKEVLASERDNLLIRVAQAKERTEVIEKPVEKWLNDVENLLRAVEDLVQRMETDNNCFQGWFPTCRRYLLCKQMVQEISTIGKLKGKSNDIQPFSHRAQLPGIQYHSSEDFIYFESTKLAYNELMEALKDDCISIIGVYGLGGCGKTTLVTEVGKKSEELDMFDKVISITVSRTPNNRGIQGKIADMLNLKLMEESEEGRAQRIWLRLKDNKRILLILDDLWREFHLKDIGIRLDNVNRSTWKILVTTRREHVCTLMDCQKNIHLGLLSEDESWTLFRKFARIDDEYSELLDSVPRRICNECKGLPITIKTIGSSLKGRQEIEWQQAFDMLRDSKASNDEDTLMPTLNCFKFSYDYLQRPEAQRLFLMCSLFPEDYHIPIEDLMRYAIGQGVERTHSLQSTRSLIQAHINKLLDSCLLMPGSVKMHDMVRDAALWIANRSENCKILVNLDEPLSIAAENNKISDCFAVSSWWYNESPSFCQLHAPNLKMLLLNIVGHRSWNSLDLSHLIFEGIQGLEVLSLTIDYKIVPLSFPPSIQLLTNVRTLRLNGLKFGDISFIGSLTRLEVLDLRRCEFDELPTKIGKLKSLKLLDLSECHIFENNYNGAIGKCSNLEELYASACYPEEYVYEIILDIGVLPNLQRFVLNDPIVRERTRVLQLNDFDISKLRTTKKIFLQIAEIVVLRGLHGECKNIIPNMVEVVGGMNNLSTLCFVDCQEIECILDKTSDSKVDDLIPMLVELRLQIMRNLKGLCQGPTLQVLPFFEKLEILELRYCPQLHNIFPLECKLHNLKSLNLSYSRSSEVLFPLSVAQSLLQLEKLIVEGCDELKHIILCDREHDFNARTEIVQAQRDSHFLMPCLREVKIHDCWKLESIFPICYVEGLSQLQMIDVWNVPQLEYVFDECYHAYQPFQDNIFLPNLEVLKLCNLHNLFGMFPLDYSQVGWPYESLRKLTVQHCSRFSRLWLDVMVGSFPIHHLLNDTNPSKLQELVVSGIHHLSIILWNLPISSLLYLQYVQVSNCENLKCLFSMEKHSSLPELMSLRVYDCQKLEQIFEANEEHLQLPNMEVYFPKLKHIEVQNCNNLKSLFPVAMVRMLPQLSTLRISKANQLEEVFKRGPGDDIINQMEVVLPNLSDITLDDLPSFIDIFHTSKLYVVKPLKLCIYKCPKASLNLRNKFRMKLEETADEMMKLLSS 1219
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car05g01036 1219 Gene3D - 381 462 IPR036388 -
Car05g01036 1219 Coils Coil 19 50 - -
Car05g01036 1219 PRINTS Disease resistance protein signature 236 250 - -
Car05g01036 1219 PRINTS Disease resistance protein signature 330 344 - -
Car05g01036 1219 PRINTS Disease resistance protein signature 610 626 - -
Car05g01036 1219 PRINTS Disease resistance protein signature 163 178 - -
Car05g01036 1219 Gene3D Ribonuclease Inhibitor 719 935 IPR032675 -
Car05g01036 1219 Gene3D Ribonuclease Inhibitor 939 1152 IPR032675 -
Car05g01036 1219 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 127 397 IPR027417 -
Car05g01036 1219 Pfam NB-ARC domain 151 383 IPR002182 GO:0043531
Car05g01036 1219 Gene3D - 131 292 IPR027417 -
Car05g01036 1219 PANTHER - 13 987 - -
Car05g01036 1219 PANTHER - 731 1175 - -
Car05g01036 1219 Coils Coil 58 82 - -
Car05g01036 1219 PANTHER NB-ARC DOMAIN DISEASE RESISTANCE PROTEIN 731 1175 - -
Car05g01036 1219 PANTHER NB-ARC DOMAIN DISEASE RESISTANCE PROTEIN 13 987 - -
Car05g01036 1219 Gene3D Ribonuclease Inhibitor 512 684 IPR032675 -
Car05g01036 1219 SUPERFAMILY L domain-like 452 1133 - -
Car05g01036 1219 SUPERFAMILY RNI-like 719 988 - -
Car05g01036 1219 Gene3D - 295 380 IPR042197 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car05g01036 Car-Chr5 51443604 51448068 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car05g01036 161 483 WRKY Transcription Factor Family AT5G45050 24.625 7.94e-08 55.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car05g01036 - - mtr:MTR_3g053200 1503.42