Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car05g01033 ATGTCGAACTTGCCCCAATCTCTGTCTATGAACGCTGCTGCTTTCGGTGTTGGTGGTGGTATTCCTCCTTCTCCTTCTGCCACCTCTCAATCCTCCGCTGCTAACAAAGATCGCAAGATGGCTTCTGCTGAGCAACTCGTTCTCGAACTCAGTAACCCTGAACTCCGTGAAAATGCTCTTCTCGAACTCTCCAAGAAGAGAGAGCTGTTTCAAGATCTTGCTCCATTGTTGTGGAATTCATTTGGTACTATTGCAGCACTTTTGCAGGAAATAGTTTCAATATACCCAGTTCTGTCACCACCCAATCTGACTCCAGCACAATCAAATAGAGTGTGCAATGCTCTTGCTCTACTCCAGTGTGTAGCATCTCACCCTGATACAAGGATGCTGTTCCTCAATGCTCACATTCCATTGTATCTGTATCCCTTCCTCAACACAACAAGCAAGTCAAGGCCTTTTGAGTACTTGAGGCTTACTAGTCTTGGTGTCATCGGTGCATTGGTTAAGGTTGATGATACAGAGGTTATCAGTTTTCTGCTTTCGACCGAAATCATTCCCTTGTGCTTGCGCACTATGGAAATGGGAAGTGAACTTTCGAAAACAGTTGCAACATTTATTGTTCAAAAGATTCTGTTGGACGATGTGGGCTTGGATTATATTTGTACTACAGCTGAGCGTTTCTTCGCAGTAGGTCGAGTTCTGGGAAACATGGTGGCAGCTCTTGCTGAGCAACCATCATCTCGTCTGTTGAAGCATATCATTCGCTGCTACCTTCGCCTTTCAGATAATCCAAGGGCTTGTGATGCACTCAGAAGCTGTCTTCCAGACATGTTAAGAGATGCTACTTTCAGCAGCTGCCTTCATGAGGACCCCACAACTAGGAAGTGGCTTCAACAATTGCTTCACAACGTTGGAGTGAATCGGGTTCCCGCACTACAAGGTGGAGGAGGTTTTGATCATCTTATGGTGAATTGA 975 0.4554 MSNLPQSLSMNAAAFGVGGGIPPSPSATSQSSAANKDRKMASAEQLVLELSNPELRENALLELSKKRELFQDLAPLLWNSFGTIAALLQEIVSIYPVLSPPNLTPAQSNRVCNALALLQCVASHPDTRMLFLNAHIPLYLYPFLNTTSKSRPFEYLRLTSLGVIGALVKVDDTEVISFLLSTEIIPLCLRTMEMGSELSKTVATFIVQKILLDDVGLDYICTTAERFFAVGRVLGNMVAALAEQPSSRLLKHIIRCYLRLSDNPRACDALRSCLPDMLRDATFSSCLHEDPTTRKWLQQLLHNVGVNRVPALQGGGGFDHLMVN 324
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car05g01033 324 PANTHER UNCHARACTERIZED 1 321 - -
Car05g01033 324 Gene3D - 34 305 IPR011989 -
Car05g01033 324 Pfam Cell differentiation family, Rcd1-like 46 304 - -
Car05g01033 324 PANTHER BNAA05G20110D PROTEIN 1 321 - -
Car05g01033 324 SUPERFAMILY ARM repeat 48 305 IPR016024 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car05g01033 Car-Chr5 51364617 51372517 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Rcd1-like Car05g01033 Rcd1 2.9e-130 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car05g01033 K12606 - gmx:100784529 587.8
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car05g01033 05 51364617 51372517 Car02g02068 02 51102642 51105029 PCT