Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car05g01024 ATGGCAGATATTGTTATCTCCATTGTGACCAAAGTTTCTGAATATTTGGTGGAACCAGCAATACGTGAGGGAAAATACATTTTTTGTGTTAATGAAATTGTTGAAGATTTTGAGAATGAAAAAAATGAGCTAATATCTGAAAGAGACAACCTTGTGAACCGTGTTGAACAAGCCAAACACAGAGCTGAAGAAATCGAAAAGTCAGTAGAGAAGTGGTTGAGTGATGTGGAAAGTCTATTGAAAGAGGTGGAAGATTTGAACCAACAGATGAAAGCAAACAAAAGTTGCTTTCAAGGAAGGTTTCCAACATGGACAAAATATCATTTGTGCAAGAAAATGGTAAAAAAGGAAAATGCAATGATGAAGTTGAAAGGCAAAAGCAATAATATTCAACCATTTTCTCACCGTGCTCCTCTTCCTGGCATTCAGTACCGGTCATTAGAAAATTTTACTTATTTTGAATCAACAAAAGTGGCTTATGATCAACTCTTGGAAGCACTTGAAGATGATAAAATCTACATGATAGGAGTGTATGGGATGGGTGGATCAGGGAAAACAACTCTTGTAACAGAAGCGTCTAAGAAGGTTGAAGGATTGAAGTTTGATAAGGTTGTACTAATCACAGTGTCTCAAACTCCAAACATTAGAGTCATTCAAGGACAAATGGCAGATGCGTTAAACATAAAATTGGAGGATGAACATGAAGAGGGAAGAGCACAACGTTTGTGGTTGAGTTTGAAACAAAATAGTCGACTTCTAATAATAGTAGACGACTTATGGAAAGAGTTTAATTTGATGGATATAGGGATTCACTTAGACAATGATAACAAGGGTGCTTGGAAGATCATTTTAACCACTCGTAATCAACATATATGTGATTTGATGCAATGTCAAAAGAATATTTATATGGGACTCTTACGTGAATATGAGTCTTGGGCTTTGTTCCAAAAACATGCAAAAGTTGATGACAGATTCTCTGAGTCATTGGATGGTGTACCACAAAAACTTTGCAATGAATGTAAGGGACTACCTATAGCAATTAAAGCAGTGGGATCTTCACTAAAAGGAAAATCCAATGACGACTGGAAGATAGCATTGCATAATTTGGCTCATCCAGATTTTATTGATGATGAAGTGGAAGGAGTGGGAGATGCTTTAAGTTGTCTTAAACTAAGTTATGATTATTTAGGAGAGAAAAAAGCTAAAATGATCTTCTTGATGTGTTCTATGTTTCCTGAAGACTATAAAATCGCAAGAGAAGATTTGATTAGATATGCAATTGGACTAGACCCAGGAAGAATGTTTTCATTAGGCATAGCAAGAAGTGGAATCGAAGCAAGCATAAACAGGCTTTTAGAATCATGTTTGTTGATGGATGTTGATGAAAACAAAGAGTATGTGAAGATGCATGACATGGTTCGTGACACGGCACTATGGATTGCAAAGGGATTGGAGAATCACAAAATCTTGGTAAATGTTGACAAACCATTTAGCAACATGGTAGAGGATAATGATATAAGAGATTGTTTTGCAATATCCTCATGGTATGAAAAGGAAGATAAAATTAATCATTTACTGCATGCTCCAAACCTTAAAATTTTATTGATCAGGGGTTCCAAAAAGTTATCCGATGAAACATTTGAAGGAATAGAAGGGCTCCAAGTACTTTCTATAATCAATGATAAATATGGTACACCATTATCATTGCCTTTGTCAGTTCATATTTTAACAAATCTTCGAACTCTACGCTTGCAAAAATGGAAATTGGGTGACATTTCTTTCATATCAAACTTAAAAAAACTAGAGGTTCTTGACTTACAAGAATGTATCCTCAATGAACTTCCTAAAGAAGTAGGAGATCTCAAAAGATTGAAGCTTCTGGATTTGTCATCCTGTGATTTTCTTGAAAACTATCATGAGTATAATGGAGCAATAGGTAAATGTTCACAATTGGAAGAGTTATATGTTTCAAAATGGTGGCAAAAAGAGTTATATTCTCAGTGTGTTGAAGATATTATTACTCTCCCAAATTTGCAAAGATTTGTAAGTTATAGTTCTTTGTACAATTATCATGTGAAATCCTCACAACTTTTACATGTAGTCAAGTTTAATATCTCCATGTTGAAGTCATCTAAAAATAATCTTCTTCAGATAGCCGAAGCTGTTCATCTTGAACAACTTAATGGAGGATTTAAAAATGTTGTCCCTGAAGTGGTTAGAGTTGTGGGAGGCATGAATGGTTTGACTTATCTCCATCTTACAAGTTGCCAAATGATAGAACGCGTCTTCGATACACCTTATGATTCTGATTCTGAGGTAGATCTTTGGATTCCAAAGTTGGTGGAGTTAGTATTGATGGAATTGGAATGTTTGAAAGAATTTTGTCGAGGCACACCGGCGCAAGTGCTACGTTTCTTCGAGAAATTAGAAAAAATTATAATATTTGATTGCCATCAGTTGCAGAACATATTTCCACATGAATGCAACTTACAAAATCTTACAAGACTCCAAATAAATAATTGCAAGTTTGGTGAAGCACTCTTCTCGATGCCTGTTGCTCGAAGTCTTCAACAGTTAGAAGAGCTGATAATAGAAGAGTGCAATGAATTAAAGCATATAATTGCCAATGCAAGAGAGCAAGATTCAAATACAAGACTTGAATTAGTTACAGCTTTGCCTCTATGGAGTTCACATTTTGTAATGCCTAAATTGAAGAAACTTCACATTTCATCGTGTAGGAAGTTAGTGTCGATATTTCCAATATGCTGTTTTGAAGTACTTGCATTCCTTGAAGAGATATATATTGGGCGTGCTCCTGCTCTAGAACTTGTATTTGGTGAATGTGATCACCAAAATCATTCATCTCACCAATGCCAAAACCAGAACAATCGTCTTTGTTTGAAACAGCTCACCCTCTACGATCTTGAAAATCTCGTCGGGATATGTCCCGAAAACAATCGTGCAAAGTGGCCATCTACAAAATGTCTAACTGTGATGGAATGTCCGAAGTTGAGTCCATCATGGATTGCTACGATGGTCAGCTCTGAGGTAGGAGAAGTACATTATACCCTTTCTAATTAA 3081 0.3574 MADIVISIVTKVSEYLVEPAIREGKYIFCVNEIVEDFENEKNELISERDNLVNRVEQAKHRAEEIEKSVEKWLSDVESLLKEVEDLNQQMKANKSCFQGRFPTWTKYHLCKKMVKKENAMMKLKGKSNNIQPFSHRAPLPGIQYRSLENFTYFESTKVAYDQLLEALEDDKIYMIGVYGMGGSGKTTLVTEASKKVEGLKFDKVVLITVSQTPNIRVIQGQMADALNIKLEDEHEEGRAQRLWLSLKQNSRLLIIVDDLWKEFNLMDIGIHLDNDNKGAWKIILTTRNQHICDLMQCQKNIYMGLLREYESWALFQKHAKVDDRFSESLDGVPQKLCNECKGLPIAIKAVGSSLKGKSNDDWKIALHNLAHPDFIDDEVEGVGDALSCLKLSYDYLGEKKAKMIFLMCSMFPEDYKIAREDLIRYAIGLDPGRMFSLGIARSGIEASINRLLESCLLMDVDENKEYVKMHDMVRDTALWIAKGLENHKILVNVDKPFSNMVEDNDIRDCFAISSWYEKEDKINHLLHAPNLKILLIRGSKKLSDETFEGIEGLQVLSIINDKYGTPLSLPLSVHILTNLRTLRLQKWKLGDISFISNLKKLEVLDLQECILNELPKEVGDLKRLKLLDLSSCDFLENYHEYNGAIGKCSQLEELYVSKWWQKELYSQCVEDIITLPNLQRFVSYSSLYNYHVKSSQLLHVVKFNISMLKSSKNNLLQIAEAVHLEQLNGGFKNVVPEVVRVVGGMNGLTYLHLTSCQMIERVFDTPYDSDSEVDLWIPKLVELVLMELECLKEFCRGTPAQVLRFFEKLEKIIIFDCHQLQNIFPHECNLQNLTRLQINNCKFGEALFSMPVARSLQQLEELIIEECNELKHIIANAREQDSNTRLELVTALPLWSSHFVMPKLKKLHISSCRKLVSIFPICCFEVLAFLEEIYIGRAPALELVFGECDHQNHSSHQCQNQNNRLCLKQLTLYDLENLVGICPENNRAKWPSTKCLTVMECPKLSPSWIATMVSSEVGEVHYTLSN 1026
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car05g01024 1026 PRINTS Disease resistance protein signature 174 189 - -
Car05g01024 1026 PRINTS Disease resistance protein signature 246 260 - -
Car05g01024 1026 PRINTS Disease resistance protein signature 340 354 - -
Car05g01024 1026 PRINTS Disease resistance protein signature 619 635 - -
Car05g01024 1026 SUPERFAMILY L domain-like 468 982 - -
Car05g01024 1026 Gene3D Ribonuclease Inhibitor 519 664 IPR032675 -
Car05g01024 1026 Pfam NB-ARC domain 161 393 IPR002182 GO:0043531
Car05g01024 1026 PANTHER NB-ARC DOMAIN DISEASE RESISTANCE PROTEIN 25 1007 - -
Car05g01024 1026 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 136 408 IPR027417 -
Car05g01024 1026 PANTHER - 25 1007 - -
Car05g01024 1026 Gene3D - 144 302 IPR027417 -
Car05g01024 1026 Coils Coil 34 93 - -
Car05g01024 1026 Coils Coil 856 876 - -
Car05g01024 1026 Gene3D - 392 478 IPR036388 -
Car05g01024 1026 Gene3D Ribonuclease Inhibitor 665 944 IPR032675 -
Car05g01024 1026 Gene3D - 305 391 IPR042197 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car05g01024 Car-Chr5 51109873 51112953 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car05g01024 172 640 WRKY Transcription Factor Family AT5G45050 23.930 9.77e-09 57.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car05g01024 - - cam:101506740 2023.44