Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car05g01015 ATGAAGAAGATGTTTGTTTGGTATCATCGATTTGTGCTGTTCTTGCTGCTCACAAGGGTTTCTTCAACTTCATCACTTTCATACACTGATAATGGTCATATAGATACAAATACTGGAAGAGCACTGAATCAGGATCAGGGTGATGATCATCAAATACATTGCTCTAGAGAAAGAAGTAGAGCAGCTTGGAAGATCATTCAAGAGTATTTGACGCCATTTGTAGAGAAAGAAAAATATAATATCTCAAGAACGTGCCGGCTTCACCCTGACAATGACATATACAGAGATCAGGAACAACATAAATCTCATATAGATATAAATGAATGGCAGTGTGGATACTGTAAGAAAACTTTCTACGAAGAGAAACATCTTGATCAGCATTTTGACAACAGACACTCCAATTTACTTAATTTGAATGAAAGCCGGTGCTTAGCGGATGTATGTGGGGCACTGCACTGTGACCATGAAATGAATTCTGGTTCAAAAAAATCAAAGTGCAATCCTGCTGCTGCAGCAAGAAATAAACATCTTTGTGAGGCCATAGCCGACAGTTGTTTTCCAGTTAACGAGGGCCCTGCGGCGAGCCGGCTTCATGAATTATTCTTGCACCAATTCTGTGATGCTCACAGCTGCACTGGAAGTGGGAAGCCTTTCTCCAGAGGGCGCAGGAAAAAGACGAATGTGATCTACATCGTTGCCTCGATTTTTCTTGTGATGCTGCTGCTACTTTACTATCTCTACATTTATTTATATCAGAGAGGATTGAAAAGGGAAACTCAAATGCTGAGGCGTATATCTCAAACCGGCCGAAAAAAGAAACCATCTTAA 828 0.4046 MKKMFVWYHRFVLFLLLTRVSSTSSLSYTDNGHIDTNTGRALNQDQGDDHQIHCSRERSRAAWKIIQEYLTPFVEKEKYNISRTCRLHPDNDIYRDQEQHKSHIDINEWQCGYCKKTFYEEKHLDQHFDNRHSNLLNLNESRCLADVCGALHCDHEMNSGSKKSKCNPAAAARNKHLCEAIADSCFPVNEGPAASRLHELFLHQFCDAHSCTGSGKPFSRGRRKKTNVIYIVASIFLVMLLLLYYLYIYLYQRGLKRETQMLRRISQTGRKKKPS 275
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car05g01015 275 PANTHER TRANSCRIPTION FACTOR C2H2 FAMILY-RELATED 11 275 - -
Car05g01015 275 SUPERFAMILY Expressed protein At2g23090/F21P24.15 99 134 - -
Car05g01015 275 ProSiteProfiles Zinc finger C2H2 type domain profile. 109 134 IPR013087 -
Car05g01015 275 PANTHER ZINC FINGER PROTEIN-RELATED 11 275 - -
Car05g01015 275 ProSitePatterns Zinc finger C2H2 type domain signature. 111 132 IPR013087 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car05g01015 Car-Chr5 50888744 50892322 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car05g01015 32 275 C2H2 Transcription Factor Family AT5G63280 59.756 2.26e-108 313
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Car05g01015 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car05g01015 - - lang:109338698 451.44