Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car05g00990 ATGAAATGTCGTGAGGGTTGGATCAAGTTGAACAAGGACAATGTTTGCAGAAGGAATCATGAGACTTCAGGATGTGAAGGTCTGTTTCGCAACGATGATGGATGGTGGATCAAAGGCTACACAAACAAGATTGATTCATGTGATGCACTACATGCACAAATAGGGGGGTGTAGCTTCGAAGAAAAGGTTAGAATGGCACAAAATACGGACTACACAGCTGCAATTGTCTATGACAATGAAAATGGTGGTGTCATGGTTGCAATGGCAGGAAATTCTGTTGGTATAAGAATACATGTTGTATTTGTATCAAAAGCTTCGAGTTTGGCTCCAGAAGGATCACAATTTGATGCTAATCATTATGACACTAAGATGAATGAACTGCTTGCCAGTGATGGGCAAGAATTCTTCGCCTCATATCATGAAGTCCATGATAGCTTTGATGCAATGGGGCTGCAAGAAAACCTTATGCGAGGCATATATGCTTACAGTTTTGAGAGGCCTTCTGCAATCCAGCAACGAGGAATTGTTCCTTTCTGCAAAGGTCTAGATGTGATTCAACAGGCTCAGTCAGGAACTGGAAAGACAACAACATTTTTTCTGGAATTTTGCAGCAGCTCGTTTATGGATTGGGTGCCAGACTTTGGTTTTGACCCCTACGAGGGAGCTAGCTCAACAGATTGA 681 0.4229 MKCREGWIKLNKDNVCRRNHETSGCEGLFRNDDGWWIKGYTNKIDSCDALHAQIGGCSFEEKVRMAQNTDYTAAIVYDNENGGVMVAMAGNSVGIRIHVVFVSKASSLAPEGSQFDANHYDTKMNELLASDGQEFFASYHEVHDSFDAMGLQENLMRGIYAYSFERPSAIQQRGIVPFCKGLDVIQQAQSGTGKTTTFFLEFCSSSFMDWVPDFGFDPYEGASSTD 226
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car05g00990 226 Gene3D - 49 112 - -
Car05g00990 226 Gene3D - 135 206 IPR027417 -
Car05g00990 226 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 139 203 IPR027417 -
Car05g00990 226 PANTHER ATP-DEPENDENT RNA HELICASE DBP3 110 199 - -
Car05g00990 226 ProSiteProfiles DEAD-box RNA helicase Q motif profile. 144 172 IPR014014 GO:0003724
Car05g00990 226 PANTHER - 110 199 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car05g00990 Car-Chr5 50690956 50692361 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car05g00990 109 198 Eukaryotic Initiation Factors Gene Family AT3G13920 79.121 3.25e-44 151
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car05g00990 K03257 - cam:105852033 199.134