Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car05g00983 ATGGGTTCTTGTATAAGTAAAGGTAAAGATTCAGATTCAGAAGCAGAACAAAATGGTTATAGATATGGTGGTAATTCTGTTGTGAACAATCATAGGAATAATGAAAAAGTCAACCAAACAAGAACATCAACACAACCTAGTACTTCTAATCAACCTCAAAAACATGTTTCATCAACTCATATGAAACCTTCATCTGTTTCTGTTCCAAGTCCAAAGCCTTTTATGAAGCAAGAAACAAACACAATTCTAGGAAAAGGTTTTGAGGATGTTAAGGATTTTTACACACTTGGTAAAGAATTAGGTAGAGGGCAATTTGGGGTAACATATTTATGCACTGAGAATTCAACTAAGTTACTTTATGCTTGTAAATCAATTTCAAAGAAGAAACTTGTGAGTAAATCTGATAGAGAAGATATAAAGAGAGAGATTCAGATTATGCAGCATTTGAGTGGTCAACCAAATATTGTTGAATTTAAAGGTGCTTATGAGGATAAGAATTCTGTTCATGTTGTTATGGAACTTTGTGCTGGTGGTGAACTTTTTGATAGGATAATTGCTAAAGGACATTATAGTGAAAGAGCTGCTGCTTCTATATGTAGACAAATTGTTAATGTTGTTCATATTTGTCATTTTATGGGTGTTATGCATAGGGATCTCAAGCCAGAGAATTTTTTGTTGTCTAGTAAAGATGAAAATGCACTTATTAAGGCAACAGATTTTGGTTTGTCTGTTTTCATTGAAGAAGGAAAGGTGTATCGCGATATAGTTGGGAGTGCTTATTATGTTGCTCCAGAAGTTCTTCGGCGAAGATGTGGGAAAGAAATAGATATATGGAGTGCAGGAGTAATAATATACATCTTACTTAGTGGTGTCCCTCCATTTTGGGCTGAGACTGAAAAGGGAATATTTGATGCCATATTAGAAGGTCATATTGATTTTGAAAGTCAACCATGGCCTAAAATATCAAATAGTGCCAAAGATCTCGTTCGTAAGATGCTTATACAGGATCCGAAGAAACGCATTACTTCTGCTCAGGTTCTAGAGCATCCATGGATTAAAGATGGAAATGCATCTGATAAGCCAATAGACAGTGCAGTTCTATCTAGAATGAAGCAATTCAGAGCTATGAATAAACTAAAGAAACTCGCCCTCAAGGTCATTGCTGAGAATATGTCAGAAGAAGAGATCCGCGGTTTGAAATCAATGTTTACGAATATGGACACAGACAACAGTGGTACAATCACCTATGAAGAACTAAAAGCAGGTTTGCAAAGACTTGGATCAAAGCTTTCTGAGGCTGAAGTAAAGCAACTTATGGAAGCTGCTGATGTAGATGGAAATGGAACAATTGATTGCATTGAATTCATCACTGCTACAATGCATAGACACAAGTTAGAAAGAGATGACCATCTTTACAAGGCCTTCCAATATTTTGATAAAGACAACAGTGGGTTTATTACAAGAGATGAACTGGAAACTGCCATGAAAGAATATGGTATGGGAGATGATGCCACAATCAAGGAAATCATATCTGAAGTTGATACAATTATATTTGAAGTGGATACAGATCATGATGGTAGAATCAACTATGAAGAATTTTGTGCAATGATGAGGAGTGGAAACCAACCACAAGTCAAGCTGTTCTAA 1647 0.3576 MGSCISKGKDSDSEAEQNGYRYGGNSVVNNHRNNEKVNQTRTSTQPSTSNQPQKHVSSTHMKPSSVSVPSPKPFMKQETNTILGKGFEDVKDFYTLGKELGRGQFGVTYLCTENSTKLLYACKSISKKKLVSKSDREDIKREIQIMQHLSGQPNIVEFKGAYEDKNSVHVVMELCAGGELFDRIIAKGHYSERAAASICRQIVNVVHICHFMGVMHRDLKPENFLLSSKDENALIKATDFGLSVFIEEGKVYRDIVGSAYYVAPEVLRRRCGKEIDIWSAGVIIYILLSGVPPFWAETEKGIFDAILEGHIDFESQPWPKISNSAKDLVRKMLIQDPKKRITSAQVLEHPWIKDGNASDKPIDSAVLSRMKQFRAMNKLKKLALKVIAENMSEEEIRGLKSMFTNMDTDNSGTITYEELKAGLQRLGSKLSEAEVKQLMEAADVDGNGTIDCIEFITATMHRHKLERDDHLYKAFQYFDKDNSGFITRDELETAMKEYGMGDDATIKEIISEVDTIIFEVDTDHDGRINYEEFCAMMRSGNQPQVKLF 548
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car05g00983 548 SMART serkin_6 94 352 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car05g00983 548 ProSiteProfiles EF-hand calcium-binding domain profile. 430 465 IPR002048 GO:0005509
Car05g00983 548 ProSitePatterns EF-hand calcium-binding domain. 479 491 IPR018247 -
Car05g00983 548 ProSiteProfiles EF-hand calcium-binding domain profile. 394 429 IPR002048 GO:0005509
Car05g00983 548 MobiDBLite consensus disorder prediction 1 75 - -
Car05g00983 548 ProSiteProfiles EF-hand calcium-binding domain profile. 508 543 IPR002048 GO:0005509
Car05g00983 548 CDD STKc_CAMK 93 351 - -
Car05g00983 548 Gene3D - 360 541 - -
Car05g00983 548 Coils Coil 416 436 - -
Car05g00983 548 ProSitePatterns EF-hand calcium-binding domain. 443 455 IPR018247 -
Car05g00983 548 Pfam Protein kinase domain 94 352 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car05g00983 548 PANTHER SERINE/THREONINE-PROTEIN KINASE 43 542 - -
Car05g00983 548 SMART efh_1 398 426 IPR002048 GO:0005509
Car05g00983 548 SMART efh_1 434 462 IPR002048 GO:0005509
Car05g00983 548 SMART efh_1 470 498 IPR002048 GO:0005509
Car05g00983 548 SMART efh_1 512 540 IPR002048 GO:0005509
Car05g00983 548 ProSitePatterns EF-hand calcium-binding domain. 521 533 IPR018247 -
Car05g00983 548 ProSitePatterns EF-hand calcium-binding domain. 407 419 IPR018247 -
Car05g00983 548 ProSitePatterns Protein kinases ATP-binding region signature. 100 123 IPR017441 GO:0005524
Car05g00983 548 ProSitePatterns Serine/Threonine protein kinases active-site signature. 214 226 IPR008271 GO:0004672|GO:0006468
Car05g00983 548 Gene3D Phosphorylase Kinase; domain 1 96 179 - -
Car05g00983 548 ProSiteProfiles Protein kinase domain profile. 94 352 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car05g00983 548 Gene3D Transferase(Phosphotransferase) domain 1 180 359 - -
Car05g00983 548 ProSiteProfiles EF-hand calcium-binding domain profile. 466 501 IPR002048 GO:0005509
Car05g00983 548 SUPERFAMILY EF-hand 380 539 IPR011992 -
Car05g00983 548 MobiDBLite consensus disorder prediction 18 75 - -
Car05g00983 548 SUPERFAMILY Protein kinase-like (PK-like) 92 373 IPR011009 -
Car05g00983 548 CDD EFh 473 538 IPR002048 GO:0005509
Car05g00983 548 PANTHER CALCIUM-DEPENDENT PROTEIN KINASE 21-RELATED 43 542 - -
Car05g00983 548 Pfam EF-hand domain pair 469 538 IPR002048 GO:0005509
Car05g00983 548 Pfam EF-hand domain pair 399 459 IPR002048 GO:0005509
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car05g00983 Car-Chr5 50527115 50532410 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car05g00983 24 548 EF-hand Containing Proteins AT3G20410 73.953 0.0 823
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CDPK Car05g00983 Pkinase 1.7e-73 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car05g00983 K13412 - gmx:100798651 909.827
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car02g02041 02 50880587 50885257 Car05g00983 05 50527115 50532410 ECH
Car05g00983 05 50527115 50532410 Car05g00983 05 50527115 50532410 ECH