Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car05g00939 ATGGCAATAATTAAAGCTTCTTACACCATCACTCCAAATGAATCAACCCCAAATGGTAGTTTATGGCTCTCTGATTTAGATCAAATTTTTCGTCCATTCCACACAACACTTATTTACATTTACAAACCCAAAAAAGAAAACCAAAAAAACTTAACACAAACATTGAAAAACTCTCTTAGCAAAATTCTAGTTCCTTATTATCCTATAGCTGGTCGTTATTCTTACACAAAACTTGGTCGATTAGAATTGAATCTCAATGCAAAAGGAGCCATTTTACTTGAAGCTGAAACCACACAAACAATTCATGATTTTGGTGATTTTTCATCTTTTGACTCCATCAAAGAGCTTATTCCAAAAATCGATTTTAACCAACCCATTGAAGAGATTCCCTTGTTTGTTGTTCAACTCACAAGATTCCAAAACAAAGATGAAAACTTTGTTGCAATTGGAATTGCTTACTCACATTCTTTATCTGATGGTCTTGGTTGTTGGAACTTCATCAATTCATGGGCCAAAATAGCAAGGGGAGAAACACTAGAGGCTAATGAGTTACCTTTTTTAGATAGAACAATTCTCAAATTTTCACACACCCCTTTGAAACCATGTTTTGAACACAGAGAGTTGAAGCCACTACCATTCATTCTTGGAAGATCTGATGACAATATTGAAAGAAAGAAGAAAACAAGAGTTGAATTGTTGAAACTCACAAGAGATGAAGTTGAAAAGTTGAAGAAAAAGGCTAATGAATGTGAAATTTCAAAAGGGTCGATATCGATATCGAAATCGAGACCTTATAGTAGATTTGAAGCAATTAGTGCACATATATGGAGAAGTGCTTCAAAGGCTCGCGAGCTTAATGCGAATCAATTGAGTGTTGTTCGGTTCAACGTTCAAATCCGAAACAGAATAGTTCCAAATCTTCCTAAGAATTATTATGGGAATGCTTTGATTCAAACAGAAGCAAGAGGGTATATTGGAGAAATCACATCAAAGCCATTGAGTTATGCTGCAAAGAAGATAAGGGAAGGAAATGAGTTGATAAAAAATGAGTATATAAGGTCACAAATTGATGTTATTAGAGGTTTTGAAAATTTGGATGATGCAAGACGTTTGTTTATAGGTGGAGATGGTAAAACTCCTACATTTGTTGGGTATCCTAATTTGCATATAACAAGTTGGATGGGTTTTGCTACAAATGAAGCAGATTTTGGGTGGGGAAAGCCTATTTACTTTAGTATGGGGCATGTGACTTCATATGATAGGGCAATAATTATTAAGAGTCCTGATGATGATGCTTCTGTTACTGTGTGCATGCATTTTCAGGTTGAATTGATGCAACTTTTCAAGAAGTTCTTCTATGAGGACTTGTATGAATTGATCACATCAGCAAAATTGTGA 1398 0.3484 MAIIKASYTITPNESTPNGSLWLSDLDQIFRPFHTTLIYIYKPKKENQKNLTQTLKNSLSKILVPYYPIAGRYSYTKLGRLELNLNAKGAILLEAETTQTIHDFGDFSSFDSIKELIPKIDFNQPIEEIPLFVVQLTRFQNKDENFVAIGIAYSHSLSDGLGCWNFINSWAKIARGETLEANELPFLDRTILKFSHTPLKPCFEHRELKPLPFILGRSDDNIERKKKTRVELLKLTRDEVEKLKKKANECEISKGSISISKSRPYSRFEAISAHIWRSASKARELNANQLSVVRFNVQIRNRIVPNLPKNYYGNALIQTEARGYIGEITSKPLSYAAKKIREGNELIKNEYIRSQIDVIRGFENLDDARRLFIGGDGKTPTFVGYPNLHITSWMGFATNEADFGWGKPIYFSMGHVTSYDRAIIIKSPDDDASVTVCMHFQVELMQLFKKFFYEDLYELITSAKL 465
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car05g00939 465 PANTHER SPERMIDINE HYDROXYCINNAMOYL TRANSFERASE 4 456 - -
Car05g00939 465 Gene3D - 217 455 IPR023213 -
Car05g00939 465 Coils Coil 233 253 - -
Car05g00939 465 PANTHER TRICHOTHECENE 3-O-ACETYLTRANSFERASE 4 456 - -
Car05g00939 465 Pfam Transferase family 4 454 - -
Car05g00939 465 Gene3D - 3 210 IPR023213 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car05g00939 Car-Chr5 49468432 49470217 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car05g00939 4 454 Monolignol Biosynthesis Gene Families AT5G48930 34.368 2.02e-90 280
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car05g00939 K13065 - gmx:100778626 513.072