Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car05g00938 ATGATGAATCAAACAATAGCTCCAGAAAAACCAATGATAAAATCACATTACAATAAAATGACAAGGCTGCAAGAGAAACTGATACACTTAAAGAGGCAAATGATAAGCTTGAAAAACGAGTGGAGGAAATATAAATTGATTGATACCGAAGGTTTTAGAACAAGAAAAAGAGTGGCAACAATTAAAGCTCGTTACACTGTCATCCCTGACGAACCAACCCCACAAGGGCGTTTATGGCTTTCCGACATAGACCAAGTTGTTCGTTTCGGCCACACACCCACTTTCTACATTTACAAACCCCAAAAACAGAACCAAATTGAAAACAGCATACAAACATTGAAAAACTCTCTCACCAAAATTCTAGTTCATTACTATCCTATAGCTGGTAGACTGTGTTACACACAAGGTGCTCGACTCGAATTGAATCTCAATGCAAAAGGAGTCATTTTAATCGAAGCCGAAACAACTAAAACAATTCATGATTATGGTGACTTTTCATTCTCTGACTCCACCAAAGAGCTTGCTCCAACATTCAATTACAATACTCAACAAATTGAAGAAATGCCTCTTTTTGTTGTGCAACTCACAAAGTTCAAAAACAATGAAGGTTGTGCAATTGGTGTTGCTATGCACCACATTTTAGCAGATGGACTTGAAGCCGTTAGATTCATCAACTTATGGGCTAAATTAGCAAGAGGAGAAACACTTGATCCTAATGAGTTACCTTTTTTAGATAGAACAGTTCTCAAATTTTCACACACCCCTTTGGAACCACGTTTTGAACATATAGAATTGAAGCCACTGCCGTTGATTCTTGGAAGAACCGATACCGAAGAAGAAAGACTGAAAAAAACAACAGTTTCTTTGTTGAGACTTTCACCTGAACAAGTTGAGAAGTTGAAGAAAAAAGCCAATGAAAATAATGAAATTGTTCTAGCTATGATGAAAAAAGGGTCAAGACCTTTTAGTAGATTTGAATCAATTAGTGCACATGTTTGGAGATGTGCATTAAAGGCACGTGAGCTTGAAGAGAATCAAGAAAGTGTTGTTAGATTCAATGCTGATGTAAGAAGTAGAATTGTTCCACCTCTTCCTAAAAATTATTATGGGAATGCTTTGACACAAACAGCAGTAAAAGGGTATGTTGGAGAAATCACATCAAAGCCTTTGGGTTATGTTTCACAAAAAATAAGGGAATCAGTTGAGGTTGTAAATGATGAGTATATAAGGTCACAAATTGATGTTATTAGAGGCTTTGAAAATTTGGATGATGCAAGGAGTTTGTTTTTAGGTGATTTTGATAAGAAAACTCTTTATTTTGGGAATCCTAATTTTCATGTAACTAGTTGGTTAAGTATGCCTACTTACGAAGCTGATTTTGGTTGGGGGAAGCCTGTTTATTTTGGATTAAATTCTCTGTCTCCACACGATAGGGCATTGATTCTTCTTAGTTCTGAAGGAGATGGATCTGTTATTGTGTGTTTGCATTTTCAGATTGCACATTTGGAGCTTTTCAAGAAGTTCTTCTATGGAGATATTTGA 1542 0.3612 MMNQTIAPEKPMIKSHYNKMTRLQEKLIHLKRQMISLKNEWRKYKLIDTEGFRTRKRVATIKARYTVIPDEPTPQGRLWLSDIDQVVRFGHTPTFYIYKPQKQNQIENSIQTLKNSLTKILVHYYPIAGRLCYTQGARLELNLNAKGVILIEAETTKTIHDYGDFSFSDSTKELAPTFNYNTQQIEEMPLFVVQLTKFKNNEGCAIGVAMHHILADGLEAVRFINLWAKLARGETLDPNELPFLDRTVLKFSHTPLEPRFEHIELKPLPLILGRTDTEEERLKKTTVSLLRLSPEQVEKLKKKANENNEIVLAMMKKGSRPFSRFESISAHVWRCALKARELEENQESVVRFNADVRSRIVPPLPKNYYGNALTQTAVKGYVGEITSKPLGYVSQKIRESVEVVNDEYIRSQIDVIRGFENLDDARSLFLGDFDKKTLYFGNPNFHVTSWLSMPTYEADFGWGKPVYFGLNSLSPHDRALILLSSEGDGSVIVCLHFQIAHLELFKKFFYGDI 513
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car05g00938 513 Gene3D - 57 267 IPR023213 -
Car05g00938 513 Pfam Transferase family 60 509 - -
Car05g00938 513 PANTHER TRICHOTHECENE 3-O-ACETYLTRANSFERASE 61 513 - -
Car05g00938 513 Coils Coil 13 40 - -
Car05g00938 513 Gene3D - 274 511 IPR023213 -
Car05g00938 513 PANTHER SPERMIDINE HYDROXYCINNAMOYL TRANSFERASE 61 513 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car05g00938 Car-Chr5 49413549 49421380 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car05g00938 61 510 Monolignol Biosynthesis Gene Families AT5G48930 34.889 7.20e-92 285
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car05g00938 K13065 - gmx:100778626 553.903