Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car05g00927 ATGGAAACTGAAGAGCAAAATGTTGCAAAAGCTGAAGAACTTAAAGTCCTTGCCAATGAAGCATTCAAAGATCGGAAATTTTCCCATGCTATTGATCTATACACACAAGCAATTGAGCTAAATGGTCGAAATGCAGTTTACTTTGCTAATCGTGCCTTTGCCCATCTTCGGCTTGAGGAATACGGTAGTGCAATACAAGATGCTACACAGGCTATAGAAGTTGATCCTAAATATTCAAAGGGTTATTACAGGCGAGGTGCTGCTCATCTCGGGCTGGGGAAATTCAAGGAAGCACTGAAAGATTTTCAGCAGGTCAAGAAGATGTGTCCAAATGATCCCGATGCAACAAAGAAACTGAAGGAATGTGAAAAAGCAGTTATGAAACTGAAATTTGAAGAAGCAATTTCTGTACCAGGATCTGAAAAGCATCCAATAGCTGACTCCATAGATTTCCGTTCAATAGATGTCGAGCCACAGTATTCAGGAGCAAGGATAGAGGGGGATGTTATTACTTTGGATTTTGTAAAGAAAATGATGGATGATTTCAAGAATCAGAAGTGCTTGCATAAACGGTATGCATTCCAGATTGTATTGCAAACAAAAGATATGTTGCAAGCTTTGCCTTCTCTTGTTGACATAACTGTTCCTCATGGAAAACGTTTTACTGTTTGTGGCGATGTGCATGGTCAGTTCTATGATCTTTTAAATATTTTTGAGCTGAATGGACTTCCTTCAGAAGAAAATCCATATCTATTTAATGGTGACTTTGTGGATAGAGGTTCTTTTTCTTTGGAAGTCATCCTCACTTTGTTTGCATTTAAGTGCATGTCTCCATCAGCTATATATCTAGCTAGAGGAAATCATGAGAGCAAGAGCATGAACAAGATATATGGTTTTGAGGGCGAGGTGCGCTCAAAGTTGAACGAAACATTTGTCGAACTATTTGCGGAAGTATTCTGCTGTTTACCTTTGGCTCATGTGATAAATGAGAAAGTTTTCGTAGTACATGGAGGTCTTTTTAGTGTTGATGGGGTCAAACTTTCTGAAATCCGATCAATTAATCGGTTTTGTGAGCCTCCCGAGGAAGGGTTGATGTGTGAGTTGCTATGGAGTGACCCACAACCTCTCCCTGGAAGAGGCCCAAGCAAGCGTGGTGTAGGACTTTCTTTTGGTGCGGATGTTACAAAAAGGTTCTTGAAGGAAAATAATTTAGATTTAGTTGTGCGATCTCATGAAGTAAAGGACGAGGGTTATGAGATTGAACATGACGGTAAACTCATAACTGTGTTCTCTGCTCCAAATTACTGTGACCAGATGGGTAACAAAGGTGCCTTTATTCGATTTGAAGCGCCTGATCTAAAACCTAACATTATTACATTCGCAGCAGTGCCACACCCTGATGTTAAGCCAATGGCTTATGCAAACAACTTCCTCAGGATGTTCTCATAA 1449 0.401 METEEQNVAKAEELKVLANEAFKDRKFSHAIDLYTQAIELNGRNAVYFANRAFAHLRLEEYGSAIQDATQAIEVDPKYSKGYYRRGAAHLGLGKFKEALKDFQQVKKMCPNDPDATKKLKECEKAVMKLKFEEAISVPGSEKHPIADSIDFRSIDVEPQYSGARIEGDVITLDFVKKMMDDFKNQKCLHKRYAFQIVLQTKDMLQALPSLVDITVPHGKRFTVCGDVHGQFYDLLNIFELNGLPSEENPYLFNGDFVDRGSFSLEVILTLFAFKCMSPSAIYLARGNHESKSMNKIYGFEGEVRSKLNETFVELFAEVFCCLPLAHVINEKVFVVHGGLFSVDGVKLSEIRSINRFCEPPEEGLMCELLWSDPQPLPGRGPSKRGVGLSFGADVTKRFLKENNLDLVVRSHEVKDEGYEIEHDGKLITVFSAPNYCDQMGNKGAFIRFEAPDLKPNIITFAAVPHPDVKPMAYANNFLRMFS 482
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car05g00927 482 CDD MPP_PP5_C 160 475 IPR041753 -
Car05g00927 482 Pfam Calcineurin-like phosphoesterase 220 414 IPR004843 GO:0016787
Car05g00927 482 PRINTS Serine/threonine phosphatase family signature 220 247 IPR006186 GO:0016787
Car05g00927 482 PRINTS Serine/threonine phosphatase family signature 250 277 IPR006186 GO:0016787
Car05g00927 482 PRINTS Serine/threonine phosphatase family signature 283 307 IPR006186 GO:0016787
Car05g00927 482 PRINTS Serine/threonine phosphatase family signature 317 343 IPR006186 GO:0016787
Car05g00927 482 PRINTS Serine/threonine phosphatase family signature 347 374 IPR006186 GO:0016787
Car05g00927 482 PRINTS Serine/threonine phosphatase family signature 403 423 IPR006186 GO:0016787
Car05g00927 482 PRINTS Serine/threonine phosphatase family signature 425 441 IPR006186 GO:0016787
Car05g00927 482 Coils Coil 1 21 - -
Car05g00927 482 PANTHER SERINE/THREONINE-PROTEIN PHOSPHATASE 5-RELATED 11 481 - -
Car05g00927 482 Pfam Tetratricopeptide repeat 48 77 IPR019734 GO:0005515
Car05g00927 482 SUPERFAMILY TPR-like 5 137 IPR011990 GO:0005515
Car05g00927 482 Pfam Tetratricopeptide repeat 80 112 IPR001440 GO:0005515
Car05g00927 482 ProSiteProfiles TPR repeat profile. 79 112 IPR019734 GO:0005515
Car05g00927 482 SMART tpr_5 79 112 IPR019734 GO:0005515
Car05g00927 482 SMART tpr_5 45 78 IPR019734 GO:0005515
Car05g00927 482 SMART tpr_5 11 44 IPR019734 GO:0005515
Car05g00927 482 Gene3D - 136 481 IPR029052 -
Car05g00927 482 PIRSF PPPtase_5 1 482 - -
Car05g00927 482 ProSiteProfiles TPR repeat profile. 45 78 IPR019734 GO:0005515
Car05g00927 482 PANTHER BNAC09G39960D PROTEIN 11 481 - -
Car05g00927 482 Gene3D Tetratricopeptide repeat domain 1 135 IPR011990 GO:0005515
Car05g00927 482 Pfam PPP5 TPR repeat region 119 212 IPR013235 -
Car05g00927 482 SMART pp2a_7 188 464 IPR006186 GO:0016787
Car05g00927 482 SUPERFAMILY Metallo-dependent phosphatases 157 476 IPR029052 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car05g00927 Car-Chr5 49145744 49154984 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car05g00927 222 404 Calmodulin-binding Proteins AT5G63870 37.788 5.79e-39 141
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car05g00927 K04460 - sly:543849 882.478