Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car05g00926 ATGTCGTCCTCAAATTCACCATGTGCAGCGTGCAAGTTTCTCCGACAAAAGTGCACACAAGAATGCTACTTCGCACCCTACTTTTCGCCGGATAATCCACAACGATTCGCTTCCGTTCACCGCGTCTTCGGTGCAAGCAAGGTTGCCAAGCTCTTAAAAGAGCTTCACGCCGAGGATCGCGAAGACGCGGTGAAATCATTAGCATACGAGGCTGAGTCTCGTATACGAGACCCAGTCTACGGATGTGTTGGTTTCATCTCGGTCCTCCAACAGCGTTTAAAAGAAATTCGAAATGAACTTCAGATAGCGAAAAAAGAACTTTTGAATTACAATTTTAACCCTCAAACTATGAATTACCTTTTGGCTAATCCTGGAACGGTTATCATGCCTcagcagcagcagcagcagcaATGGAACCCGCAATTTGCGGGTTTGAATAACGGATCTAACAACTTCGGTAATGATACAGTTGGAGGAGTAGGAGAGTTAGTTGTTTCTGATGCTCAGCAGCATCAGGAACAAGAGTTTCTAGAAGCTCAGCGGTTTGTTGCCGCTACTCAACAAGAGTATTTTCTTAGGTTAGGTGGTGGTGGTGTCGGTGTCGGTGTCGGTGTGGCTTCTTCATTGGGTATGGGAAATTTTGAAAATGGTGGTGGTGATTATTATCGGATTGAACAACAAGGTGAAGAACAACAACAAAATTATGTTGCTCTTGGGAATGGTCATCCTATTGAGGCACAACTAATGTTTTCTCCACAAAATCAGGAAACTAGTGAGGATGGTAGGAGCGTTGGTAGTGCTCATCCTTCTTGTAATTGA 819 0.431 MSSSNSPCAACKFLRQKCTQECYFAPYFSPDNPQRFASVHRVFGASKVAKLLKELHAEDREDAVKSLAYEAESRIRDPVYGCVGFISVLQQRLKEIRNELQIAKKELLNYNFNPQTMNYLLANPGTVIMPQQQQQQQWNPQFAGLNNGSNNFGNDTVGGVGELVVSDAQQHQEQEFLEAQRFVAATQQEYFLRLGGGGVGVGVGVASSLGMGNFENGGGDYYRIEQQGEEQQQNYVALGNGHPIEAQLMFSPQNQETSEDGRSVGSAHPSCN 272
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car05g00926 272 ProSiteProfiles LOB domain profile. 6 107 IPR004883 -
Car05g00926 272 PANTHER LOB DOMAIN-CONTAINING PROTEIN 4-RELATED 1 250 - -
Car05g00926 272 Pfam Lateral organ boundaries (LOB) domain 7 104 IPR004883 -
Car05g00926 272 Coils Coil 86 113 - -
Car05g00926 272 PANTHER LOB DOMAIN-CONTAINING PROTEIN 32-RELATED 1 250 - -
Car05g00926 272 MobiDBLite consensus disorder prediction 253 272 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car05g00926 Car-Chr5 49115047 49115944 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car05g00926 1 135 AS2 family AT5G66870 64.444 2.06e-55 179
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Car05g00926 LOB 8.6e-39 No_clan