Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car05g00925 ATGAAACTTACCTTCTTCCAGGACTTGTTGCTCCATTTTAATTTTAAAGTATCAAGGTCATCAATTACCCAAGGTCAAAGGAGAAGAGTTTCAGAAGTAGTTGAAATCAACACCTTCATCCCTAGCGAAAACCTCTGCAAGCTTCAAGAAATTGAGGGAAGAAAAAAAACTACAAATCTTGATAGTATTTTCATGGTAATGGAATACATGGAACATGATCTTGAAGGATTGATGGAGTCAATGAAGCAACCATTTAGCCAAAGTGAAGTGAAGTGCTTAATGATCCAGCTTTTAGAAGGTGTGAAGTATCTTCATGACAACTGGGTGCTTCATAGGGATCTGAAGACTTCAAACCTGCTTCTAAATAACAAGGGTGGCACCAGCGAGATCCAGCTAAGGCAAGGAACTTCGTGTCGCGGCTGCTCCACTCCGCCGCGGTCTCATGAACTGAACTTCGTCGCCTTCCCGCGCGCGAAGCGAATGGGCGTTATGCGGTGGGTCAGTTTTGGGGCAGGGAGCGAAGAGAGACGATTTTGCATGCTCTGGAATGCAATTGAGGTTATTGATCTTACAAAACCTTACAAGTTACCTAATATAGGGGCAAATTTGGAGAGTAACACAAGAGCAATTGAACTTGGTTCATCTGTTGGTGCAAAAAGTAATTACTGTTATGAGAATGAGGCTCATAATCTGAATCCAAGAAGTCATCTTGGGTTTGATTCTCTTGACCCAAATGGTGTGCTGAAATCTTCTCAGAATTTGGATTAG 768 0.4219 MKLTFFQDLLLHFNFKVSRSSITQGQRRRVSEVVEINTFIPSENLCKLQEIEGRKKTTNLDSIFMVMEYMEHDLEGLMESMKQPFSQSEVKCLMIQLLEGVKYLHDNWVLHRDLKTSNLLLNNKGGTSEIQLRQGTSCRGCSTPPRSHELNFVAFPRAKRMGVMRWVSFGAGSEERRFCMLWNAIEVIDLTKPYKLPNIGANLESNTRAIELGSSVGAKSNYCYENEAHNLNPRSHLGFDSLDPNGVLKSSQNLD 255
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car05g00925 255 ProSiteProfiles Protein kinase domain profile. 1 255 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car05g00925 255 SMART serkin_6 15 195 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car05g00925 255 ProSitePatterns Serine/Threonine protein kinases active-site signature. 109 121 IPR008271 GO:0004672|GO:0006468
Car05g00925 255 PANTHER - 60 125 - -
Car05g00925 255 Pfam Protein kinase domain 23 125 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car05g00925 255 SUPERFAMILY Protein kinase-like (PK-like) 16 125 IPR011009 -
Car05g00925 255 Gene3D Phosphorylase Kinase; domain 1 18 69 - -
Car05g00925 255 PANTHER CELL DIVISION PROTEIN KINASE 60 125 - -
Car05g00925 255 Gene3D Transferase(Phosphotransferase) domain 1 70 125 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car05g00925 Car-Chr5 49057918 49062275 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car05g00925 43 125 Core Cell Cycle Gene Families AT5G10270 43.617 3.15e-16 75.9
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_CDK-PITSLRE Car05g00925 Pkinase 1.6e-17 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car05g00925 K08818 - rcu:8278447 136.732