Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car05g00913 ATGCAGCAAGATCATAGGAAAAAGAGTTCGACCGAGATGGACTTTTTCTCCGAATACGGCGATGCCAACCGGTACAAGATTCAAGAAGTCATCGGGAAAGGAAGTTACGGTGTTGTTTGTTCAGCCATCGACACTCACACCGGCGAAAAAGTGGCTATTAAGAAAATTCATGACATCTTTGAGCATATATCCGATGCTGCACGTATTCTCCGTGAGATAAAGCTGCTACGACTGCTTCGACATCCTGATATCGTTGAAATAAAACATATTATGCTGCCTCCTTCTAGGAAGGACTTCAAAGATATTTATGTTGTTTTTGAGCTCATGGAATCGGATCTTCATCAAGTCATTAAAGCAAATGATGACTTAACTAAAGAGCATTATCAGTTTTTTCTTTATCAATTGCTTCGAGCACTCAAGTATATTCACACTGCGAATGTCTATCATCGAGATTTGAAGCCAAAAAATATACTGGCAAATGCAAACTGTAAACTCAAAATTTGTGATTTTGGACTAGCTAGAGTTGCTTTCAGTGACACACCAACAACTATATTTTGGACGGATTATGTTGCTACAAGGTGGTATAGAGCTCCAGAGCTATGTGGGTCATTTTACTCTAAGTATACACCAGCGATTGATATTTGGAGTATAGGTTGTATCTTTGCGGAAGTACTAACAGGAAAGCCACTTTTTCCTGGAAAAAATGTAGTTCATCAGTTGGATCTAATGACCGATCTTCTCGGCACTCCCTCACTGGATACTATATCGCGAGTGCGCAATGAAAAGGCAAGGAGATACCTAACTAGCATGAGAAAGAAGCAGCCTGTGTCATTTGCACAAAAATTTCCCAATGCAGATCCTTTAGCACTACGACTTTTGGAAAGGCTACTTGCTTTTGACCCAAAAGACCGCCCTACGGCCGAAGAGGCACTGGCTGACCCTTACTTCAAGGGACTGGCAAAAGTCGAGAGGGAACCCTCCTGCCAGCCTATCACCAAAATGGAGTTTGAATTTGAAAGACGTAGAGTCACAAAGGAAGAAATTCGAGAGCTAATTTTCCGAGAGATTCTAGAGTACCATCCTCAACTTTTGAAAGACTACATGAATGGAACAGAGAGAACTAATTTTCTCTACCCAAGTGCTGTGGATCAATTCAGAAAGCAGTTTGCTCATCTCGAGGAAAATGGTAAAAATGGTCCCGTTATGCCGCTTGATCGAAAGCATGTTTCTCTTCCAAGGTCAACAATTGTACATTCAAATACAATACCCCAAAAAGAGCAAACAAGTATTGCTTCCAGCAAAAATCGGCAAACACCCGAGGAATATAATAAGAACTCTAGAGATACTGAAATTCCAATGCTAAGGCCCATGCAAGGGCCACAAAGAATTCCACTAGCAAAACCTGGTAAAGTTGTCGGACCTGTCGCTCCCTACGAGTATGGAAATGTCGTTAAGGATTCTTATGATGCAAGGGCATATATCAGAGGTACTGTACTTCCTCCTCAACCTGTTCCACCAGCATATTACTATCAAAGGCCTAGTAGCACTGCAAATCAAGAAAGACAAGCAACAATAGAAGCTGATAAAGGTGTTCTTTTGCAAACTAAACACGGACAACAATGTGGAGTTAATGCGAAAATAGCAGCAGATATAGCCATTAATATTGATACAAATCCCTTTTTCATGACAAGGATAGGAGCAAACAAGTTAGAAAAAGATGATCAAATTGCAATAGAAACAAACTTGTTGCAGCCAAAAGCTCAATATGGTGGAGTTGGTGCTGCTACTGGAGCCACTGCTCATAGAAAAGTCGGGCCTATTCAATACGGTATGACAAGAATGTTCTAG 1848 0.4096 MQQDHRKKSSTEMDFFSEYGDANRYKIQEVIGKGSYGVVCSAIDTHTGEKVAIKKIHDIFEHISDAARILREIKLLRLLRHPDIVEIKHIMLPPSRKDFKDIYVVFELMESDLHQVIKANDDLTKEHYQFFLYQLLRALKYIHTANVYHRDLKPKNILANANCKLKICDFGLARVAFSDTPTTIFWTDYVATRWYRAPELCGSFYSKYTPAIDIWSIGCIFAEVLTGKPLFPGKNVVHQLDLMTDLLGTPSLDTISRVRNEKARRYLTSMRKKQPVSFAQKFPNADPLALRLLERLLAFDPKDRPTAEEALADPYFKGLAKVEREPSCQPITKMEFEFERRRVTKEEIRELIFREILEYHPQLLKDYMNGTERTNFLYPSAVDQFRKQFAHLEENGKNGPVMPLDRKHVSLPRSTIVHSNTIPQKEQTSIASSKNRQTPEEYNKNSRDTEIPMLRPMQGPQRIPLAKPGKVVGPVAPYEYGNVVKDSYDARAYIRGTVLPPQPVPPAYYYQRPSSTANQERQATIEADKGVLLQTKHGQQCGVNAKIAADIAINIDTNPFFMTRIGANKLEKDDQIAIETNLLQPKAQYGGVGAATGATAHRKVGPIQYGMTRMF 615
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car05g00913 615 Gene3D Transferase(Phosphotransferase) domain 1 111 339 - -
Car05g00913 615 ProSitePatterns MAP kinase signature. 60 163 IPR003527 GO:0004707|GO:0005524|GO:0006468
Car05g00913 615 MobiDBLite consensus disorder prediction 425 455 - -
Car05g00913 615 PANTHER MITOGEN-ACTIVATED PROTEIN KINASE 9 491 - -
Car05g00913 615 SUPERFAMILY Protein kinase-like (PK-like) 21 320 IPR011009 -
Car05g00913 615 ProSiteProfiles Protein kinase domain profile. 25 316 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car05g00913 615 SMART serkin_6 25 316 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car05g00913 615 PANTHER MITOGEN-ACTIVATED PROTEIN KINASE 9 491 - -
Car05g00913 615 ProSitePatterns Protein kinases ATP-binding region signature. 31 55 IPR017441 GO:0005524
Car05g00913 615 MobiDBLite consensus disorder prediction 425 439 - -
Car05g00913 615 CDD STKc_TDY_MAPK 24 361 - -
Car05g00913 615 Pfam Protein kinase domain 25 316 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car05g00913 615 Gene3D Phosphorylase Kinase; domain 1 40 362 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car05g00913 Car-Chr5 48419398 48425725 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car05g00913 1 440 MAP Kinase Gene Family AT2G42880 87.982 0.0 802
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_MAPK Car05g00913 Pkinase 6.3e-68 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car05g00913 - - gmx:100811788 1113.6
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car05g00913 05 48419398 48425725 Car02g01991 02 50371606 50377833 PCT