Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car05g00888 ATGAGGACAAAATACACTCTGTTTCTGTTCTTTATTGAACTTGTGGTTCATTTTTCAATATCAAACAGTGGAAAAGTTCCAGCTATAATAGTGTTTGGTGACTCCTCTGTTGATTCAGGTAACAACAATTTCATTCCAACCATAGCAAAGAGCAATTTTGAACCATATGGTAGAGATTTTCCAAATGGTAATCCTACTGGTAGATTCTCCAATGGTCGTATTCCCTCTGATTTCATCTCTGAAGCATTTGGTCTTAAATCAATTGTTCCTGCTTACTTGGATCCTTCTTATGATATATATGATTTTGCTACTGGTGTTTGTTTTGCTTCTGCTGGTACTGGCTATGATAATGCTACTTCAAATGTTGCTGATGTAATACCATTATGGAAAGAAGTTGAATTCTACAAGGATTACCAAAAGAAATTAAGGGCATGTCTTGGTGATGAGAAAGCTAATGAAATAGTAAAGGAGGCTTTATATTTGGTTAGCATAGGAACAAATGATTTTCTTGAGAATTATTACACACTTCCTGATCGAAGGGCTCAATTTACAACTGTTCAAAAGTATGAGGATTTTTTAATTGGACTTGCTGAAAATTTTCTTAGGAAAATTTATGACCTTGGAGCAAGGAAAATTTCTCTGACAGGATTACCTCCAATGGGGTGTTTGCCACTTGAGAGAGCCTTAAATATTATGGATCTTCATGGTTGTGTGGATGAATACAATGATGTGGCTTTGGAATTTAATGCAAAATTGGGAAGGTTAGTGACAAAGTTAAACAAGAAACTCCCTGGATTTCAATTGGTGGATGCAAATGGATATAATATCTTACTTCAAATTGTTACACAACCTTCTCATTTTGGTTTTGAAGTTGAAACAGTGGGGTGTTGTGGAACGGGTAGATTTGAGATGGGTTATTTATGTAATGCAAAAAGCCCATATACATGCACAAATGCAAATAAATATGTATTTTGGGATGCTTTTCACCCATCACAAAGAACAAGTCAGATAATATCGAGTTATTTAATAGAAAAATATCTTGTCAAGTTTCTATGA 1056 0.3456 MRTKYTLFLFFIELVVHFSISNSGKVPAIIVFGDSSVDSGNNNFIPTIAKSNFEPYGRDFPNGNPTGRFSNGRIPSDFISEAFGLKSIVPAYLDPSYDIYDFATGVCFASAGTGYDNATSNVADVIPLWKEVEFYKDYQKKLRACLGDEKANEIVKEALYLVSIGTNDFLENYYTLPDRRAQFTTVQKYEDFLIGLAENFLRKIYDLGARKISLTGLPPMGCLPLERALNIMDLHGCVDEYNDVALEFNAKLGRLVTKLNKKLPGFQLVDANGYNILLQIVTQPSHFGFEVETVGCCGTGRFEMGYLCNAKSPYTCTNANKYVFWDAFHPSQRTSQIISSYLIEKYLVKFL 351
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car05g00888 351 CDD SGNH_plant_lipase_like 27 346 IPR035669 -
Car05g00888 351 Pfam GDSL-like Lipase/Acylhydrolase 29 342 IPR001087 GO:0016788
Car05g00888 351 PANTHER GDSL ESTERASE/LIPASE EXL3 5 350 - -
Car05g00888 351 SUPERFAMILY SGNH hydrolase 156 344 - -
Car05g00888 351 PANTHER GDSL-LIKE LIPASE/ACYLHYDROLASE 5 350 - -
Car05g00888 351 Gene3D SGNH hydrolase 16 347 IPR036514 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car05g00888 Car-Chr5 47682090 47688276 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car05g00888 1 344 Pollen Coat Proteome AT1G75910 37.176 1.33e-68 217
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car05g00888 - - gmx:100778745 570.081