Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car05g00887 ATGGTGGTGAAAGTGTACGGCCCAATCTATGGTTCCCCGAAAAGAGTGCTAGTGTGTTTGTTTGAGAAGGAAATTGAGTTTGAAACATTAGATATTGATCTCTTCAAGGGAGAGCATAAACAACCTGACTTTCTCAAACTCCAGCCTTTTGGAGAAGTTCCTGTTGTTCAAGATGGTGATTATACCCTCTATGAATCTAGAGCTATAATCAGATACTATGCAGAAAAGTATAAGAATCAAGGAACTGATTTATTGGGAAAGACAATAGAAGAAAGGGGACTAGTGGAACAATGGCTTGAAGTTGAAGCACACAACTTTCACCCAGCAATCTACAACTTAGTCATCAATGTTCTGTTTGCCCCATTACAAGGCACTCCCTCTAACCAAAAAGTGATTGAAGAGAGTGATGAGAAGCTAAAGAAAGTGTTGGATATTTATGAAGAGAAGCTATCAAAGACAAAGTACTTAGCTGGTGATTTCTTCAGCCTTGCTGATCTTAGTCATCTCCCATTTGGTCACTATTTGGTGAACCAAACTGGGAGAGGAAATTTAGTTCGAGAGAGGAAACACGTGAGTGAGTGGTGGGATGATATTAGCAACAGACCATCGTGGAAGAAGGTTCTGGAACAATATAAATACCCTGTGTAG 648 0.3997 MVVKVYGPIYGSPKRVLVCLFEKEIEFETLDIDLFKGEHKQPDFLKLQPFGEVPVVQDGDYTLYESRAIIRYYAEKYKNQGTDLLGKTIEERGLVEQWLEVEAHNFHPAIYNLVINVLFAPLQGTPSNQKVIEESDEKLKKVLDIYEEKLSKTKYLAGDFFSLADLSHLPFGHYLVNQTGRGNLVRERKHVSEWWDDISNRPSWKKVLEQYKYPV 215
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car05g00887 215 Gene3D - 86 208 - -
Car05g00887 215 CDD GST_N_Phi 2 76 - -
Car05g00887 215 ProSiteProfiles Soluble glutathione S-transferase N-terminal domain profile. 1 81 IPR004045 -
Car05g00887 215 SFLD Glutathione Transferase (cytosolic) 12 201 IPR040079 -
Car05g00887 215 SFLD Main (cytGST) 12 201 - -
Car05g00887 215 SUPERFAMILY GST C-terminal domain-like 78 209 IPR036282 -
Car05g00887 215 Gene3D Glutaredoxin 1 85 - -
Car05g00887 215 PANTHER GLUTATHIONE S-TRANSFERASE RHO 2 215 - -
Car05g00887 215 SUPERFAMILY Thioredoxin-like 3 81 IPR036249 -
Car05g00887 215 CDD GST_C_Phi 90 208 IPR034347 -
Car05g00887 215 ProSiteProfiles Soluble glutathione S-transferase C-terminal domain profile. 88 215 IPR010987 -
Car05g00887 215 Pfam Glutathione S-transferase, C-terminal domain 113 202 IPR004046 -
Car05g00887 215 PANTHER GLUTATHIONE S-TRANSFERASE 2 215 - -
Car05g00887 215 Pfam Glutathione S-transferase, N-terminal domain 2 74 IPR004045 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car05g00887 Car-Chr5 47638260 47640277 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car05g00887 1 215 Glutathione S-transferase Gene Family AT2G30870 59.070 1.10e-100 289
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car05g00887 K00799 - gmx:100499911 395.586
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car05g00887 05 47638260 47640277 Car02g01966 02 50180630 50181978 PCT