Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car05g00881 ATGTTGGCCTCTAGAGAAATGATGACTTTCCAATCTTACCAGGACCAGGCTAACTTATTCGTGAAGGATTATTTACTAGCAGACTCTTGGATTCCGTATACTTCTATTGTTGGTGGCATTTTTGCTTGCAAACTGATCTATGATCTTACTCAGCTTGTGTGTACTAATTACTTTAAGAGCTATTCCAGCTTCTCAAAAATTCAACGTATTGAATGGAATAACCGAGCTATATCAACTATTCATTCAGTTTTCATAACAACTATGTCATTATACTTGGTGTTTTGCTCAAATTTGTTTTCTGACAACCAGTCTACTGAACCTATTACAGTTCGAAGCTCTTCATTGTCAACATTTGCACTGGGGGTTTCTGTTGGTTACTTCATTTCTGATTTTGCGATGATTCTTTGGTTCTTTCCTTCTCTTGGTGGATATGAGTATGTCATTCATCATCTGCTTTCTTTAGTGGCAGTAGCATATTCAATGTTGAGTGGGGAAGGGCAGCTTTACACATACATGGTCCTGATCTCTGAGACAACTACTCCAGGAATCAATTTGAGATGGTATCTTGATGTAGCTGGTATGAAAAGATCCAAAGCTTATCTCATCAATGGGGTTGTAATATTCCTTGCTTGGATGGTTGCCAGAATACTTCTGTTCATTTATTTGTTTTACCATGTGTACTTGCATTTTAATCAGGTTGAGCGGATGCACATCATTGGGCAGATATTGGTAGTTGTTGTGCCATTGGTGCTATCTGTTATGAACTTGGTTTGGTTTGCAAAGATTGTTAAAGGCTTGAGGAAGACATTGGCAAAGAGGCAGTAA 825 0.3818 MLASREMMTFQSYQDQANLFVKDYLLADSWIPYTSIVGGIFACKLIYDLTQLVCTNYFKSYSSFSKIQRIEWNNRAISTIHSVFITTMSLYLVFCSNLFSDNQSTEPITVRSSSLSTFALGVSVGYFISDFAMILWFFPSLGGYEYVIHHLLSLVAVAYSMLSGEGQLYTYMVLISETTTPGINLRWYLDVAGMKRSKAYLINGVVIFLAWMVARILLFIYLFYHVYLHFNQVERMHIIGQILVVVVPLVLSVMNLVWFAKIVKGLRKTLAKRQ 274
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car05g00881 274 ProSiteProfiles TLC domain profile. 67 271 IPR006634 GO:0016021
Car05g00881 274 PANTHER TRAM, LAG1 AND CLN8 (TLC) LIPID-SENSING DOMAIN PROTEIN 8 274 - -
Car05g00881 274 Pfam TLC domain 71 264 IPR006634 GO:0016021
Car05g00881 274 SMART lag1_27 67 271 IPR006634 GO:0016021
Car05g00881 274 PANTHER CT120 PROTEIN 8 274 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car05g00881 Car-Chr5 47458428 47467096 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car05g00881 - - gmx:100817391 463.766
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car05g00881 05 47458428 47467096 Car02g01955 02 49891418 49899604 PCT