Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car05g00874 ATGTCTGAGAAAATCACAGCAGAAAACCTTCTTCACAACCTTGTGGACACATTTGTGGAGAAGCCAAAAAAGGTATCATTCTTCGAGGAAGGGAATTCAGACTCAGTGAGCACTCAGATCAACAGACTGTTTGGACGCGAGAAACCTGTACACCATCTTTTAGGAGGCGGAAAATCTGCGGATGTCATGTTATGGAGGAACAAGAAGATTTCTGCAAGTTTTTTAACTGGTGCAACAATTGTATGGGTGCTATTTGAATGGCTCAATTATCATTTTCTTACTCTTCTATGCTTTGCTTTGGTTCTTGTCATGCTTGCACAGTTTCTATGGTCAAATGCTTCTGGCTTGTTGAACAGTACACCATCTAAGGTACCGCGTCTTGTTATCCCACAAGAATACTTTGTCAACATTGGAACTATAATTGGGAATGAGGTTAACCGTGGGTTGAGGTTTCTTCAAGATATTTCTTGTGAAGGAAACTTGAAGCTATTTCTCATTGTTGTAGCAAGTTTGTGGGTTGGTTCAGTGATTGGGAGCTGGTGCAATTTTTTGACTGTCATCTATATTGGTATTGTCGCTGCTCATACACTTCCAGTTTTCTATGAGAAGTATGAGGATGAAGTTGACAACTTTGTGTTCCAGGTCCTTGGTCAAGTACAAAATAACTATAGAAAGCTTGATGCCGGTGTGCTCAGCAAAATCCCCAAAGGAAATCTCAAAGGAAAAAAACATGAGTAG 738 0.4024 MSEKITAENLLHNLVDTFVEKPKKVSFFEEGNSDSVSTQINRLFGREKPVHHLLGGGKSADVMLWRNKKISASFLTGATIVWVLFEWLNYHFLTLLCFALVLVMLAQFLWSNASGLLNSTPSKVPRLVIPQEYFVNIGTIIGNEVNRGLRFLQDISCEGNLKLFLIVVASLWVGSVIGSWCNFLTVIYIGIVAAHTLPVFYEKYEDEVDNFVFQVLGQVQNNYRKLDAGVLSKIPKGNLKGKKHE 245
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car05g00874 245 PANTHER RETICULON-LIKE PROTEIN B8 1 245 - -
Car05g00874 245 Pfam Reticulon 60 212 IPR003388 -
Car05g00874 245 PANTHER RETICULON 1 245 IPR045064 GO:0009617
Car05g00874 245 ProSiteProfiles Reticulon domain profile. 59 245 IPR003388 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car05g00874 Car-Chr5 47173816 47179501 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car05g00874 - - gmx:100801782 389.037
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car05g00874 05 47173816 47179501 Car02g01828 02 48467713 48472057 PCT
Car05g00874 05 47173816 47179501 Car02g01950 02 49854033 49857336 PCT