Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car05g00862 ATGGCCACTCCTCACTTTGTGTACcttcttctacttgtctccttcactactttttcttcttcACTTCCACCACTTTCTTTGAAAAACCAAGCTTCAATCTTAGTTTCCATGAAACAAGATTTTGAAGCTTCTAACTCTTCTCTAAGCACTTGGAACATCTCAAACTACATGTCACTTTGCACTAATTGGTATGGCATTCAATGTGACCATAATAAAATCTTTGTAATGTCACTTGATATTTCAAATTTAAATATTTCAGGTTCACTTTCACCTCTTATAACAAAACTCACTACCCTTGTCAATGTTTCAATCCAAGGAAATAGCTTCTGTGGTGAGTTTCCAATCAATATTCACAACCTACAAAATCTTAAATTCCTCAACATATCAAACAACATGTTTAGTGGAAACTTGAGTAGTATGGAATTTAACAAGTTAAAGGAGCTTGAAGTTTTAGATGTTTATAACAATGCTTTCAATGGTTCACTTCCTCATGGTGTTACTCAATTGTTAAATCTCAAGCATTTGAATTTTGGTGGCAATTATTTCTATGGAAGGATTCCTCCAAGTTATGGAAAAATGAAGAATCTCAAATTTTTGTCACTTGCTGGAAATGATTTGAGTGGTTTTTTACCTAGTGAGCTTGGAAATTTAACAAACTTGGAATATCTTTATTTAGGTTATTACAATCAATTTGAAGGTGGAATTCCACATGAGTTTGGTAAGTTGGAGAATTTGGTTCATTTAGACCTAGCAAATTGTTTATTGAAAGGTTCAATTCCAAATGAGTTAGGGAAACTTTACAAGTTAGATACACTTTTCTTGCAAACAAATCAACTCACTGGTTTTATTCCACCTGAGTTAGGTAACTTGAGTAGATTGAATGCTCTTGATTTATCACTCAACAACTTAACAGGTGGAATTCCAAATGAATTCTCAAACCTTCATCAACTTTCACTTTTGAATTTGTTCATCAACAGGCTTCATGGTGAGATTCCTGAATTTGTTTCTGAGTTTCCAAATTTGGAAGTGCTTAAGCTCTGGAGAAATAACTTCACTGGAGTTATTCCTCCAAAGCTAGGTCGAAATGGAAAAATAACTGAGCTTGATTTGTCAACAAATAAACTCACTGGATTAGTGCCAAAATCACTTTGTTTTGGAAATAGGCTCAAGATTTTGATCTTGCTAAACAATTTTTTGTTTGGTAATTTGCCTTATGAACTTGGTCAATGTTACACATTACAAAGAGTTAGAATTGGTCAAAACTATTTGACAGGTTCAATTCCACATGGTTTTCTTTATTTGCCAAATCTTTCACTTTTGGAATTACAGAACAATTATCTCAGTGGTTTGATTCCACAACAAAAAGGCCAAAAAGAAAACACTACCTCTAAATTAGAACAGTGTAATTTATCAAACAATAGGTTTTCAGGTTCACTTCCAAACTCAATTGGAAATTTTCCAAATTTGCAAATTCTCCAACTTTATGGAAACAGATTCTCAGGTGAAATTCCATCAGATATAGGAAGACTAAAAAATATCCTCAAATTGGATTTTAACAGTAACAATTTTTCAGGTACTATTCCTAATGAGATAGGTAAATGTAATTTACTTACTTATTTGGATTTGAGTCAAAACCAATTTTCAGGTCCTATTCCAATTCAAGTCTCTCAAATTCATATCTTAAACCATTTTAATGTCTCATGGAATCACCTAAACCAAACAATTCCAAAAGAGCTAGGAAACTTAAAGGGCTTAACTTCAGCAGATTTTTCTCACAATAACTTCTCTGGTTCAATACCAGAAGGTGGACAATTCTCAACTTTTAAGTCATCATCCTTTGAAGGTAACCCTAATTTATGTGGTTATGATTTCAATCCATGCAAACTTTCATCAACAAAAGAATTGGAGTCAAACCAAAAAAGTGGAATCACAACAACAAAGTTCAAGTTCCTTTTAGCATTGTCATTATTGGTTTGTTCATTGATTTTTGCAACATTGGCTATTATCAAGAGTAGGAAATCAAGGGAATCATCATCAAATTCATGGAAGCTAACATCATTTCAAAAGATGGAATATGGAAGTGAAGATATCATAGGTTGTTTAAAAGAGAGTAATGTTATAGGAAGAGGTGGAAATGGTGTTGTTTACAAAGGAAAAATGCCAAATGGTGATGAAGTTGCTGTGAAAAAGTTGTTAGGTTCTTCACATCATGATGATAATGGTTTCTCAGCTGAGATAAAAACATTAGGGAGAATAAGGCATAGGTATATTGTTAGGTTGGTTGCATTTTGTTCAAACAAAGAAACAAATTTGCTAGTTTATGAGTACATGAGGAATGGAAGCTTAGGTGAAGTTTTGCATGGGAAAAAGGGTGAGTTTCTTAAGTGGGAAACTAGGTTGAAAATTGGTGTTGAAGCTGCTAAAGGACTTTGTTATTTGCATCATGATTGTTTGCCTTTGATTATTCATAGAGATGTTAAGTCAAATAACATTTTGTTGAATGATGAATTTGAGGCTCATGTTGCTGATTTTGGACTTGCTAAGTTTATGCAGCATGGTAATGGGACTTCTGAATGTATGTCTTCAATTGCTGGTTCTTATGGATATATTGCTCCAGAATATGCATACACATTGAAAGTTGATGAGAAAAGTGATGTATATAGTTTTGGAGTGGTGCTGCTAGAACTAATAACAGGGAAAAGGCCTGTTGGGGATTTTGAGGAAGAAGGATTAGACATTGTTCAATGGACCAAAATGAAAACCAATTGGAACAAAGAGATGGTTATGAAGATCCTTGATGAGAGGCTACCACACATTCCTTTAGATGAAGCAAAACAAGTGTTTTTTGTGGCCATGCTATGTGTTCATGAACATAGTGTCGAGAGACCAACTATGAGGGAAGTGGTTGAAATGCTTGAACAAGCAAAGCAACAAAACATATTTCAAATGCAGAAAAACAtgtag 2964 0.3327 MATPHFVYLLLLVSFTTFSSSLPPLSLKNQASILVSMKQDFEASNSSLSTWNISNYMSLCTNWYGIQCDHNKIFVMSLDISNLNISGSLSPLITKLTTLVNVSIQGNSFCGEFPINIHNLQNLKFLNISNNMFSGNLSSMEFNKLKELEVLDVYNNAFNGSLPHGVTQLLNLKHLNFGGNYFYGRIPPSYGKMKNLKFLSLAGNDLSGFLPSELGNLTNLEYLYLGYYNQFEGGIPHEFGKLENLVHLDLANCLLKGSIPNELGKLYKLDTLFLQTNQLTGFIPPELGNLSRLNALDLSLNNLTGGIPNEFSNLHQLSLLNLFINRLHGEIPEFVSEFPNLEVLKLWRNNFTGVIPPKLGRNGKITELDLSTNKLTGLVPKSLCFGNRLKILILLNNFLFGNLPYELGQCYTLQRVRIGQNYLTGSIPHGFLYLPNLSLLELQNNYLSGLIPQQKGQKENTTSKLEQCNLSNNRFSGSLPNSIGNFPNLQILQLYGNRFSGEIPSDIGRLKNILKLDFNSNNFSGTIPNEIGKCNLLTYLDLSQNQFSGPIPIQVSQIHILNHFNVSWNHLNQTIPKELGNLKGLTSADFSHNNFSGSIPEGGQFSTFKSSSFEGNPNLCGYDFNPCKLSSTKELESNQKSGITTTKFKFLLALSLLVCSLIFATLAIIKSRKSRESSSNSWKLTSFQKMEYGSEDIIGCLKESNVIGRGGNGVVYKGKMPNGDEVAVKKLLGSSHHDDNGFSAEIKTLGRIRHRYIVRLVAFCSNKETNLLVYEYMRNGSLGEVLHGKKGEFLKWETRLKIGVEAAKGLCYLHHDCLPLIIHRDVKSNNILLNDEFEAHVADFGLAKFMQHGNGTSECMSSIAGSYGYIAPEYAYTLKVDEKSDVYSFGVVLLELITGKRPVGDFEEEGLDIVQWTKMKTNWNKEMVMKILDERLPHIPLDEAKQVFFVAMLCVHEHSVERPTMREVVEMLEQAKQQNIFQMQKNM 987
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car05g00862 987 SMART LRR_typ_2 486 510 IPR003591 -
Car05g00862 987 SMART LRR_typ_2 434 455 IPR003591 -
Car05g00862 987 SMART LRR_typ_2 242 266 IPR003591 -
Car05g00862 987 SMART LRR_typ_2 145 169 IPR003591 -
Car05g00862 987 SMART LRR_typ_2 193 217 IPR003591 -
Car05g00862 987 SMART LRR_typ_2 338 362 IPR003591 -
Car05g00862 987 PANTHER UNNAMED PRODUCT 6 981 - -
Car05g00862 987 ProSiteProfiles Protein kinase domain profile. 701 981 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car05g00862 987 Gene3D Ribonuclease Inhibitor 229 385 IPR032675 -
Car05g00862 987 Gene3D Transferase(Phosphotransferase) domain 1 777 987 - -
Car05g00862 987 SMART serkin_6 701 981 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car05g00862 987 Pfam Leucine rich repeat N-terminal domain 28 69 IPR013210 -
Car05g00862 987 Gene3D Ribonuclease Inhibitor 28 139 IPR032675 -
Car05g00862 987 Gene3D Ribonuclease Inhibitor 386 460 IPR032675 -
Car05g00862 987 ProSitePatterns Serine/Threonine protein kinases active-site signature. 821 833 IPR008271 GO:0004672|GO:0006468
Car05g00862 987 Gene3D Ribonuclease Inhibitor 463 525 IPR032675 -
Car05g00862 987 Gene3D Ribonuclease Inhibitor 526 627 IPR032675 -
Car05g00862 987 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE BAM3 6 981 - -
Car05g00862 987 Gene3D Ribonuclease Inhibitor 140 228 IPR032675 -
Car05g00862 987 Pfam Protein tyrosine and serine/threonine kinase 702 972 IPR001245 GO:0004672|GO:0006468
Car05g00862 987 Gene3D Phosphorylase Kinase; domain 1 667 776 - -
Car05g00862 987 SUPERFAMILY Protein kinase-like (PK-like) 689 978 IPR011009 -
Car05g00862 987 ProSitePatterns Protein kinases ATP-binding region signature. 707 730 IPR017441 GO:0005524
Car05g00862 987 SUPERFAMILY RNI-like 77 423 - -
Car05g00862 987 SUPERFAMILY L domain-like 389 626 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car05g00862 Car-Chr5 46504865 46509976 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car05g00862 17 974 Receptor kinase-like Gene Family AT5G65700 56.386 0.0 1058
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Car05g00862 PK_Tyr_Ser-Thr 9.2e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car05g00862 - - gmx:100815103 1458.74