Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car05g00828 ATGGGATTCACCTACATTTATATAACAAAGGCAAAATATAAAGAGAAAACAGATAAAACCATCACATTAGGAGAGAAGGTTGAAGACAATAATGAAGATTATGAACTTCCTATCTTTGATCAAGCTACAATACTCAAGGCCACAAATAGCTTCTCAATTAATAACAAGCTCGGTGAAGTTGGTTTTGGACCGGTATACAAGGGTACATTGTTCGATGGACAAAAAATTGCTGATAAAAGACTTTCAAAGAGTTCTAGGCAAGGATTAAAAGAGTTCAAAAATGAAGTTATATTATGTGCTAAACTTCAACATCGAAATCTTGTCAATGTTGTTGGTTGTTGTATTCAGGGAGAGGAGAAAATGTTGATCTATGAATATATCCCCAAAAAAAGTCTCGATTCATTTATTTTTGGTGAGTAA 420 0.331 MGFTYIYITKAKYKEKTDKTITLGEKVEDNNEDYELPIFDQATILKATNSFSINNKLGEVGFGPVYKGTLFDGQKIADKRLSKSSRQGLKEFKNEVILCAKLQHRNLVNVVGCCIQGEEKMLIYEYIPKKSLDSFIFGE 139
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car05g00828 139 Pfam Protein tyrosine and serine/threonine kinase 52 136 IPR001245 GO:0004672|GO:0006468
Car05g00828 139 ProSiteProfiles Protein kinase domain profile. 51 139 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car05g00828 139 PANTHER CYSTEINE-RICH RLK (RECEPTOR-LIKE KINASE) PROTEIN 12 138 - -
Car05g00828 139 Gene3D Phosphorylase Kinase; domain 1 25 126 - -
Car05g00828 139 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 12 138 - -
Car05g00828 139 SUPERFAMILY Protein kinase-like (PK-like) 28 138 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car05g00828 Car-Chr5 45019247 45020355 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car05g00828 26 137 Receptor kinase-like Gene Family AT4G38830 57.143 3.32e-36 129
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Car05g00828 PK_Tyr_Ser-Thr 3.9e-13 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car05g00828 - - gmx:100790436 194.897