Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car05g00827 ATGGCCATTCTCCCTTCCGTTCTTCTTATTACCAAGCTACTACTACTCTTCTCCACAATTTCCTCTGCGACAGATACCATAACCCACTCACAATCACTTCTCGATGGAAGCACGTTGGTTTCAAAAGACGGAACATTCGAATTGGGTTTTTTCAATCCAGGTAATTCCCCAAACCGCTATGTTGGAATTTGGTACAAACAAATCCCAATTAGAAGAGTAGTTTGGGTTGCAAATCGTGACAATCCAACCAAAGACAATTCAAGCAAGTTGATCATAACTCAAGATGGAAACCTTAAACTTCTCAATCAAAATCAATCACTTATATGGTcaacaaacacaacaacaacaacaacaaAGGTTTCAAATCTAATTGTTCAACTCTTGGACAATGGAAATTTAGTATTGAAAAATGAGAAAGATAACAATATTGAAGAAAATTTTCTTTGGCAGAGTTTTGATCATCCATGTGATACAATATTACCAGGTATGAAGGTTGGATGGAACAAAAAAAAGGGTCTTGATAGGAGTCTACTAAATTCATGGAAAAATTGGGACGATCCATCTTCAAGTGACTTTACTTCAGATATGGTATTGACTCCGAATCCTGAAAGCAGGATTCAGAGAGGTTCAACCATACTCTACCGAACAGGACCATGGTCTGGTCCTCAATCCGGTGGAATACTTGGAACGAAGGAAAATCCACTTTATAATTATGAATTTGTCAACAATGATGATGAAGTGTATTACATATTCAATCTCAAGAATAGTTCCGTTGTTTCTATAATTGTTTTTAACCAAACAATTTCTCTTCGTGTACGCCTCGTTTGGATTTCAGAATCAAAGATTTGGAGTGTATACCAAAAGTTACCACAAGATAGTTGTGATACATACAATGTTTGTGGGGCAAATGCGCGATGTGCGATTGATGCATCACCTATGTGTGAATGCTTGGATGGGTTTAAGCCAAAATCGGCAAGAAAGTGGAATGCAATGGATTGGAGTGATGGATGTGTGAGAAGTGGTAATTGGAGTTGTGGGGTTAAAGATAGAGATGGGTTTGGTAGAATTGTTGGGATGAAATTGCCAGATACTACACATTCTTGGATTGATTATAAAATGACACTTAAAGAATGTAAAGAAAAATGTTTGAAAAATTGTTCTTGCAGTGCTTACTCAAACTTAGACTCAACTGGAGAAGGCAGTGGTTGCTCAATTTGGTTTGGTAATCTTATTGATCTGAGAGTTTTGCCAAGCGGACAAGATTTATATGTTCGAACTGACGCGGCAATTATTGGTGATAAAAATGGGCATACCAAAACAATAGTATTGGGGGTTTCAATCACAGTTTCAATAGTCCTTGTGATGCTACTGGGATTCACCTACATTTATATAACAAAGGCAAAACATAAAGATAAAATCATAATGTTAGGAGAGAAAGTTGAAGACAAAAATGAAGATTATGAACTTCCTATCTTTGATCAAGCTACAATACTCAAGGCCACAAATAACTTCTCAATTGATAACAAGCTCGGTGAAGGTGGTTTTGGACCGGTATACAAGGGTACATTGTTCGATGGACAAGAAATTGCTGTCAAAAGGCTTTCAATGAGTTCTGGACAAGGATTAAAAGAGTTCAAAAATGAAGTCATATTATGTACTAAACTTCAACACCGAAATCTTGTCAAGGTTGTTGGTTGTTGTACCGAGGGAGAAGAGAAAATGTTGATCTATGAATACATGCCCAACAAAAGTCTTGATTCATTTCTTTTTGATCCATTTCAAAGTACAATGTTAGATTGGTCTACACGCTTTAATATTCTATTTGGAATTGCTCGGGGAATTCTTTATCTTCATCAAGATTCAAGATTAAGAATCATACATAGAGATCTAAAAGTGAGCAATATTTTACTAGACAATGACATGAATCCAAAAATTTCAGATTTTGGTTTGGCCAGAATGTGCGGAGGTGATCAAATTGAAGGGAGAACAAATAGAATAGTTGGCACATATGGTTATATGGCTCCTGAATATGCTATTGATGGATTATTCTCCATAAAATCAGATGTATTTAGCTTTGGCGTATTATTGTTAGAAATTATAAGTGGAAGGAAAAATAGAGCGCTTACCTACCATGAGCACGATCTCAATCTTATTGGACATGTAGGTACCACTAAGTACAAAATTCTCTAA 2190 0.3575 MAILPSVLLITKLLLLFSTISSATDTITHSQSLLDGSTLVSKDGTFELGFFNPGNSPNRYVGIWYKQIPIRRVVWVANRDNPTKDNSSKLIITQDGNLKLLNQNQSLIWSTNTTTTTTKVSNLIVQLLDNGNLVLKNEKDNNIEENFLWQSFDHPCDTILPGMKVGWNKKKGLDRSLLNSWKNWDDPSSSDFTSDMVLTPNPESRIQRGSTILYRTGPWSGPQSGGILGTKENPLYNYEFVNNDDEVYYIFNLKNSSVVSIIVFNQTISLRVRLVWISESKIWSVYQKLPQDSCDTYNVCGANARCAIDASPMCECLDGFKPKSARKWNAMDWSDGCVRSGNWSCGVKDRDGFGRIVGMKLPDTTHSWIDYKMTLKECKEKCLKNCSCSAYSNLDSTGEGSGCSIWFGNLIDLRVLPSGQDLYVRTDAAIIGDKNGHTKTIVLGVSITVSIVLVMLLGFTYIYITKAKHKDKIIMLGEKVEDKNEDYELPIFDQATILKATNNFSIDNKLGEGGFGPVYKGTLFDGQEIAVKRLSMSSGQGLKEFKNEVILCTKLQHRNLVKVVGCCTEGEEKMLIYEYMPNKSLDSFLFDPFQSTMLDWSTRFNILFGIARGILYLHQDSRLRIIHRDLKVSNILLDNDMNPKISDFGLARMCGGDQIEGRTNRIVGTYGYMAPEYAIDGLFSIKSDVFSFGVLLLEIISGRKNRALTYHEHDLNLIGHVGTTKYKIL 729
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car05g00827 729 Pfam Protein tyrosine and serine/threonine kinase 505 704 IPR001245 GO:0004672|GO:0006468
Car05g00827 729 Gene3D Transferase(Phosphotransferase) domain 1 580 725 - -
Car05g00827 729 SMART ntp_6 348 426 IPR003609 -
Car05g00827 729 PIRSF SRK 1 728 IPR024171 GO:0004674
Car05g00827 729 CDD B_lectin 30 155 IPR001480 -
Car05g00827 729 SMART blect_4 30 155 IPR001480 -
Car05g00827 729 Pfam S-locus glycoprotein domain 214 324 IPR000858 GO:0048544
Car05g00827 729 ProSiteProfiles Bulb-type lectin domain profile. 24 148 IPR001480 -
Car05g00827 729 Pfam D-mannose binding lectin 73 182 IPR001480 -
Car05g00827 729 Gene3D Phosphorylase Kinase; domain 1 465 579 - -
Car05g00827 729 Gene3D Hepatocyte Growth Factor 344 425 - -
Car05g00827 729 SUPERFAMILY alpha-D-mannose-specific plant lectins 73 187 IPR036426 -
Car05g00827 729 CDD PAN_AP_plant 344 426 - -
Car05g00827 729 ProSiteProfiles Protein kinase domain profile. 504 729 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car05g00827 729 ProSiteProfiles PAN/Apple domain profile. 345 427 IPR003609 -
Car05g00827 729 PANTHER CYSTEINE-RICH RLK (RECEPTOR-LIKE KINASE) PROTEIN 32 721 - -
Car05g00827 729 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 32 721 - -
Car05g00827 729 Pfam PAN-like domain 345 413 IPR003609 -
Car05g00827 729 ProSitePatterns Serine/Threonine protein kinases active-site signature. 625 637 IPR008271 GO:0004672|GO:0006468
Car05g00827 729 SUPERFAMILY Protein kinase-like (PK-like) 487 708 IPR011009 -
Car05g00827 729 Gene3D - 18 152 IPR036426 -
Car05g00827 729 SMART serkin_6 504 727 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car05g00827 Car-Chr5 45011620 45015667 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car05g00827 433 723 Receptor kinase-like Gene Family AT4G23190 54.266 6.47e-100 318
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Car05g00827 PK_Tyr_Ser-Thr 1.2e-45 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car05g00827 - - gmx:100790436 1029.24