Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car05g00825 ATGCATGTTCTGAGCAAACATATAAAAGGTCATAAAACTGTTTGCAAGGAGTTAGGAATCGGAAAAGCTGAATTATGCCAAATCATAAAGGATGATCCACTAGAGTTTATTAGATTGGCTTCAAAACCGGAACAGAAGGGGACTAGAAGGGACTACTATGATGACCCGCGTTGTTATTTGGAGAAAACAACTTTCTTGTTGAAATTGGGGTATCTTGAGAACTCTGAGGAGATGGAAGAAGCGGTGAAGGTGTTTAAAGGGAGAGGTGATCAGTTACAAGAGAGATTCGATTGCCTGGTAGAAGCTGGTTTGGATTATAACAGAGTGGTTGAAATGATAAAGCGAGTTCCTGTGATTCTAAATCTGAAGAGAACTTTAATTCAAAAGAAGATTGATTTCTTAATAAATGTTTTAGGTTACCCAATAGAATGTCTTTTGGGATACCCGACATACTTTTGCCATGATTTGGACAAAATTACTGCAAGATTTTCAATGTATGAGTGGTTGAAGACGAGGAATGCAATAAATCCTGAGTTAAACTTGAGTAGCATAGTTTCATCTAATGAAAAACGGTTTGTAAAATACTTTGTGAATGTGCATCCTGAAGGTCTATACCTTGTTACACCAAGGTCATGGAAGTATTGGAAGCGGTTACAATACATCAACTTAGAATGGGATTCTTGA 684 0.3713 MHVLSKHIKGHKTVCKELGIGKAELCQIIKDDPLEFIRLASKPEQKGTRRDYYDDPRCYLEKTTFLLKLGYLENSEEMEEAVKVFKGRGDQLQERFDCLVEAGLDYNRVVEMIKRVPVILNLKRTLIQKKIDFLINVLGYPIECLLGYPTYFCHDLDKITARFSMYEWLKTRNAINPELNLSSIVSSNEKRFVKYFVNVHPEGLYLVTPRSWKYWKRLQYINLEWDS 227
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car05g00825 227 Gene3D Transcription termination factor 3, mitochondrial 2 205 IPR038538 -
Car05g00825 227 Pfam mTERF 84 192 IPR003690 GO:0003690|GO:0006355
Car05g00825 227 PANTHER CGI-12 PROTEIN-RELATED 3 205 IPR003690 GO:0003690|GO:0006355
Car05g00825 227 PANTHER MITOCHONDRIAL TRANSCRIPTION TERMINATION FACTOR FAMILY PROTEIN 3 205 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car05g00825 Car-Chr5 44910565 44911628 Dispersed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR mTERF Car05g00825 mTERF 1.8e-13 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car05g00825 - - cam:105851478 416.772