Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car05g00823 ATGACAACATGCTTGAATCCACAAACCAATGAAGATGATTCTGTAATCCTCTTTTCAACTTCCAATTCACCGGAAGATGATTCCATTAGTCctttttcttcttcttcttcttcCTACAATTcaccaccaccaccaacactacatcatcattaccaATTCAAGAAAACAGCATACAAACTTTCTGTCAAAAACCTCACTTATACTTTTTGTCAAAAACAGCCTGCAATAAACATACTAAAATCTGTCTCTTTTGTTGCTACAACTTCTGAGATTGCTGCTGTTGTTGGTCCAAGTGGCACAGGTAAATCAACCCTTCTCCGAATAATCGCGGGTAGGGTCAAAGACAAACACTTTGATCCCAAAACTATATCAATTAATGATCAACCTATGACTAGTCCATCTCAGTTAAAGAAAATTTGTTGCTTTGTATCACAACATGACAACTTGCTTCCTCTTCTAACTGTCAAAGAAACTTTGCTGTTTAGCGCGAAATTTCGACTAAAACAAATGACACCAAAAGATAGAGAAACAAGAGTAGAAAGCCTTATGCAAGAGCTAGGACTTTTTCATGTTCAAAATAGTTTTGTTGGTGATGAAGAGAATAGAGGTGTATCAGGTGGAGAAAGAAAAAGGGTTTCAATTGGTGTTGATATGATTCACAATCCACCAATTTTGGTCTTAGATGAACCAACTTCAGGACTTGATAGTACCTCAGCTTTGCATGTGATTGAGCTTTTATCATCAATGGTTAAAGCAAAGAAAAGGATAGTGATTCTTTCAATTCATCAACCTAGTTATAGAATATTGAAATATATTTCTAAGTTCTTGATACTATCTCATGGTTCACTTGTTCATAATGGTAGCATAGAGTCACTAGAAGAAACTATATCTAATTTGGGTTTTCAAATTCCAATTCAACTCAATGCTCTTGAATTTTCCATGGAAATTATACAAAGTTTAGAAGAATATTCTAGTTCTAGTTCTAGTTCCAAACGTGTCACCATTGAGGAAAATGAGACTTTTCCAAGGACAATTTGGCAAGAGGAAGAAAAGGGTCTTGTCCAATTCCAACAACAATATCAAAAGGAAAGTTTTTTCAATCTTTGTTATGTGAACTTCATGGAGATACTATTTCTTTGTTCAAGATTTTGGAAGATTATTTATAGAACAAAACAACTTTTCTTGGCTAGAACAATGCAAGCATTAGTTGGTGGATTTGGTTTAGGAAGTGTTTATATAAAAGTAAGAAAAGATGAAGTAGGAGTTGGTGAAAGGTTAGGACTATTTGCATTTAGTCTTAGTTTTCTCTTATCTTCAACAGTTGAAGCACTTCCTATATACCTTCAAGAGAGAACTGTTCTTATGAAAGAAGCTTCAGGAGGAGCATATAGAATCTCTTCTTACATGATAGCCAACACTATTGTTTTCATTCCTTTCTTGTTTGTGGTTTCTATCCTTTTTGCTGTCCCTGTTTATTGGCTTGTAGGACTCAACCCTTCATTCAAAGCCTTCACTTTTTTCACTTTTGTGGTTTGGCTCATTGTGCTAATGGCAAGTTCATTAGTCCTTTTTTTGAGTTCTATTTCCCCTGATTTTATTTCAGGAAACTCACTCATTTGCACTGTTCTTGGAGCCTTTTTCTTGTTCTCTGGCTACTTCATACCAAAAGAGAGCATTCCAAAATATTGGATTTTTATGTATTATGTGTCACTTTATAGGTACCCTTTGGATGCACTTTTGATAAATGAGTATTGGAATGCTGGAAATGAGTGTTTTTCGGAACAACAAACAGAAGGGTCTTCCTCAAAGTGTTTGGTTACTGGATTTGATGTGTTGAAGAGTAGAGGACTTGAAAAGGATAATAGGTGGATGAATGTCGGGATAATGATTGGTTTCTTTTTTTTCTATCGTGTGCTTTGTTGGGTTATACTTGCTAGAAAGGCCTCAAAGACAACAATATAA 1962 0.34 MTTCLNPQTNEDDSVILFSTSNSPEDDSISPFSSSSSSYNSPPPPTLHHHYQFKKTAYKLSVKNLTYTFCQKQPAINILKSVSFVATTSEIAAVVGPSGTGKSTLLRIIAGRVKDKHFDPKTISINDQPMTSPSQLKKICCFVSQHDNLLPLLTVKETLLFSAKFRLKQMTPKDRETRVESLMQELGLFHVQNSFVGDEENRGVSGGERKRVSIGVDMIHNPPILVLDEPTSGLDSTSALHVIELLSSMVKAKKRIVILSIHQPSYRILKYISKFLILSHGSLVHNGSIESLEETISNLGFQIPIQLNALEFSMEIIQSLEEYSSSSSSSKRVTIEENETFPRTIWQEEEKGLVQFQQQYQKESFFNLCYVNFMEILFLCSRFWKIIYRTKQLFLARTMQALVGGFGLGSVYIKVRKDEVGVGERLGLFAFSLSFLLSSTVEALPIYLQERTVLMKEASGGAYRISSYMIANTIVFIPFLFVVSILFAVPVYWLVGLNPSFKAFTFFTFVVWLIVLMASSLVLFLSSISPDFISGNSLICTVLGAFFLFSGYFIPKESIPKYWIFMYYVSLYRYPLDALLINEYWNAGNECFSEQQTEGSSSKCLVTGFDVLKSRGLEKDNRWMNVGIMIGFFFFYRVLCWVILARKASKTTI 653
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car05g00823 653 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 60 305 IPR003439 GO:0005524
Car05g00823 653 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 59 296 IPR027417 -
Car05g00823 653 SMART AAA_5 88 283 IPR003593 -
Car05g00823 653 MobiDBLite consensus disorder prediction 17 46 - -
Car05g00823 653 PANTHER ABC TRANSPORTER G FAMILY MEMBER 23 2 646 - -
Car05g00823 653 Gene3D - 47 299 IPR027417 -
Car05g00823 653 PANTHER ABC TRANSPORTER G FAMILY MEMBER 28 2 646 - -
Car05g00823 653 Pfam ABC-2 type transporter 262 329 IPR043926 GO:0140359
Car05g00823 653 Pfam ABC-2 type transporter 376 584 IPR013525 GO:0016020|GO:0140359
Car05g00823 653 ProSitePatterns ABC transporters family signature. 204 218 IPR017871 GO:0005524
Car05g00823 653 Pfam ABC transporter 79 232 IPR003439 GO:0005524
Car05g00823 653 MobiDBLite consensus disorder prediction 17 45 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car05g00823 Car-Chr5 44870282 44872243 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car05g00823 60 335 Calmodulin-binding Proteins AT2G36910 24.825 2.19e-12 68.6
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car05g00823 05 44870282 44872243 Car05g00823 05 44870282 44872243 ECH