Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car05g00820 ATGTGGTGTCTTTATCATGCAAAAACAACATTGTTTCTATCTTGCATTCTATTATTTTTCTTTCTCTTTGGTCTTATACTTTATCATACTTTCCAGCAACACAGCTGTTGTGCATATGAATTGAAGGTCAGACTTGAGCATATCCTTGAGAGGATTGCATTGATATCTGAGGCTGCAAATACAGAGAGACCATCCGCCATTACAAATAGCCTGTACATCGGTGGAGCACTATCCGCAAGATCTGTATACACAATGCAACACTTGGGAATCACTCATATTTTGTGTTTATGTACTAATGAAATTGGACAATCAGATTCTCAATTTCCTGATCTATTCATTTACAAAAATTTCTCTGTGTGCGACAATGAGGATGTTAACATCAGCAGAATATTTGATGAAGCTTGTGATTTTATAGAAGCTGTTGAGCGAACAGGCCAGAGTGTTTTAGTTCATTGCTTTGAAGGGAAAAGCAGAAGTGTCACTGTAGTCCTAGCTTACTTGATGCTCAGAAAGAAGTTCACATTAATAGAAGCATGGAATGCTATGAAAAAAGTTCACCATCGAGCGCAGCCGAATGATGGTTTTGCTAAGATTTTACAGGAACTTGATCAAAAACTGTATGGAAAGGTTTCAATGGAGTGGCGGCGGTGGTGGAAACCAACGATGAAAGTTTGCCCAATATGTGGCAAGGATGCTGGATTGAGGAGCAATTCCCTTAAGCTGCATCTACAGAGAGCACATCAGGGAGTGTAG 753 0.3944 MWCLYHAKTTLFLSCILLFFFLFGLILYHTFQQHSCCAYELKVRLEHILERIALISEAANTERPSAITNSLYIGGALSARSVYTMQHLGITHILCLCTNEIGQSDSQFPDLFIYKNFSVCDNEDVNISRIFDEACDFIEAVERTGQSVLVHCFEGKSRSVTVVLAYLMLRKKFTLIEAWNAMKKVHHRAQPNDGFAKILQELDQKLYGKVSMEWRRWWKPTMKVCPICGKDAGLRSNSLKLHLQRAHQGV 250
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car05g00820 250 ProSiteProfiles Dual specificity protein phosphatase domain profile. 63 208 IPR020422 GO:0006470|GO:0008138
Car05g00820 250 SUPERFAMILY (Phosphotyrosine protein) phosphatases II 63 208 IPR029021 -
Car05g00820 250 ProSiteProfiles Tyrosine specific protein phosphatases domain profile. 128 184 IPR000387 GO:0016311|GO:0016791
Car05g00820 250 Pfam Dual specificity phosphatase, catalytic domain 71 204 IPR000340 GO:0008138|GO:0016311
Car05g00820 250 SMART dsp_5 63 205 IPR020422 GO:0006470|GO:0008138
Car05g00820 250 Gene3D Protein tyrosine phosphatase superfamily 45 215 IPR029021 -
Car05g00820 250 CDD DSP 64 201 - -
Car05g00820 250 PANTHER DUAL SPECIFICITY PROTEIN PHOSPHATASE PHS1 38 248 - -
Car05g00820 250 PANTHER DUAL SPECIFICITY PROTEIN PHOSPHATASE PHS1 38 248 IPR035010 GO:0004721|GO:0009737|GO:0043622
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car05g00820 Car-Chr5 44775931 44777613 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car05g00820 23 248 Protein tyrosine phosphatase (PTP) family AT5G23720 68.282 4.82e-102 315
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car05g00820 K14165 K17614 ahf:112770730 357.066