Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car05g00813 ATGCATAGGATTATGCTTCCCTCTCATTCTTGCTCTGTTCTTTCAGTTTCAACCTACTTGAACCAAAGCAATTTCTCACAAATATTCAAAACCCCTTTCCGTGTGATGGATTGGAGATGTAGCTGTGTTATGTTAGTTGTTATTATGTTTCTGCCGTTCATGGTTTCTTCGGGTTCCATTGTCAAGAACCTGCCGGGTTTTGATGGGGATCTTCCATTCAAGCTTGAAACTGGATACATAGGAGTGGGAGAAGGAGCAAAGGTGCAAATATTTTACTATTTTGTGGAGTCTCAAAGAAATCCCTTCATTGATCCAATTTTACTTTGGTTCGTTGGAGGTCCAGGATGCTCTGGCCTTTCAGCATTCTTTTTTGAAAACGGGCCTTTAAAAATGGATCCTAATTACAGTGAGAACCTTCCAAAGCTGAAATTGAATCCATATGCTTGGACACATATGTTGAATATGATATACATAGATATGCCAGTAGGGACTGGGTTTTCTTACTCAGAAACACAAGAAGGTTACTATAGCAATGCCACACTATGGGTGGATCATACATATTCTTTTTTACAAAAGTGGTTTATTGAACATTCAAAGTTTAGCTCAAATCCATTTTACATTGGTGGTGGCTCATATTCAGGACTAACTACTGGTCCTCTTGTTCAAAAAGTATATGAAGGGTACATAGCAAAACAAGTGCCACTCATAAAGATCAAAGGTTATGTGATTGCAAGTCCAGCTGTTGACATATATCAGGAGAGGAACATGAAAGTCTTATATGCATATCATATGACTCTTATACCAAAAAAACTATATGAGTCGTTGGAAGAAAATTGTAAGGGTAATTATTTAATTATTGATCCAAATAACACAAAGTGTGTCTCAGATTATGAAGCTTATTCAGAGCTAATTCGTTATATAAACCCACAACAAATTTTAGAACCTTTTTGTGTCACTACACCTGCTCTGAACCAAGTAATACAACAACCAGCTCAAGATCATCCAGAATATTGTAGAAGTTATGATCATATTCTTGTTGACATATGGGCAAACGATGAAAATGTGCGCAAGGCCCTTCATGTAAGAGAGGGAACTAAGGAGGAGTTCTTGAGATGCAACAAGACTTTGGCATACAAAGAAAATTTGTTCAATGCAGTAGAATATTATCGCAATCTCACCAATGCCAACATCCAAGCTCTCGTTTACTGGTAA 1212 0.3729 MHRIMLPSHSCSVLSVSTYLNQSNFSQIFKTPFRVMDWRCSCVMLVVIMFLPFMVSSGSIVKNLPGFDGDLPFKLETGYIGVGEGAKVQIFYYFVESQRNPFIDPILLWFVGGPGCSGLSAFFFENGPLKMDPNYSENLPKLKLNPYAWTHMLNMIYIDMPVGTGFSYSETQEGYYSNATLWVDHTYSFLQKWFIEHSKFSSNPFYIGGGSYSGLTTGPLVQKVYEGYIAKQVPLIKIKGYVIASPAVDIYQERNMKVLYAYHMTLIPKKLYESLEENCKGNYLIIDPNNTKCVSDYEAYSELIRYINPQQILEPFCVTTPALNQVIQQPAQDHPEYCRSYDHILVDIWANDENVRKALHVREGTKEEFLRCNKTLAYKENLFNAVEYYRNLTNANIQALVYW 403
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car05g00813 403 PRINTS Carboxypeptidase C serine protease (S10) family signature 193 218 IPR001563 GO:0004185|GO:0006508
Car05g00813 403 PRINTS Carboxypeptidase C serine protease (S10) family signature 145 157 IPR001563 GO:0004185|GO:0006508
Car05g00813 403 PRINTS Carboxypeptidase C serine protease (S10) family signature 158 168 IPR001563 GO:0004185|GO:0006508
Car05g00813 403 Gene3D alpha/beta hydrolase 55 403 IPR029058 -
Car05g00813 403 Pfam Serine carboxypeptidase 65 402 IPR001563 GO:0004185|GO:0006508
Car05g00813 403 PANTHER SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE 43 401 IPR001563 GO:0004185|GO:0006508
Car05g00813 403 PANTHER SERINE CARBOXYPEPTIDASE-LIKE 10-RELATED 43 401 - -
Car05g00813 403 SUPERFAMILY alpha/beta-Hydrolases 61 403 IPR029058 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car05g00813 Car-Chr5 44611297 44617622 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car05g00813 55 84 Calmodulin-binding Proteins AT2G22960 70.000 6.24e-07 47.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car05g00813 K16296 - gmx:100791997 421.009