Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car05g00804 ATGGGAAATTGTTGCTCCCAAGGAGGGGATGCCCCGGCAGCGACCGACAATTCAGCCACTGCCGAAAAGGGAGAAACAAATGAACAAAACACCAGCAACGATAACGAGCCATCAACAAATCCTATGACGAcaccaccaccaacatcaaaaccaccgccgacaacctcaccatctccatcaacaAAACCCTCGAAACCGGCCGCAATGGGCCCGGTTTTACAAAGGCCAATGGAGGACCTAGGGAGAGGACAATTTGGTGTAACACATTTATGCACACATAAGGTAACAAAGGAACAATTTGCATGCAAAACAATTGCAAAGAGAAAACTAGTGAATAAAGAGGATATAGAGGATGTTAGAAGGGAGGTGCAAATAATGCATCACCTAACGGGTCAAGCAAATATTGTGGAATTAAAAGGTGCATATGAAGATAAACAATCGGTTCATTTGGTGATGGAATTATGTGCGGGTGGTGAATTATTTGATAGAATTATTGCAAAGGGACATTATACGGAACGTGCCGCAGCTTCTTTATTAAGAACAATTGTTCAAATAGTTCATACTTTGCATTCAATGGGTGTTATTCATAGAGACCTTAAGCCTGAAAATTTCTTATTGTTGAATAAGGATGAAAATGCACCCCTCAAAGCCACAGATTTTGGTCTATCCGTTTTTTTCAAACAAGGAGAGATGTTCAAGGACATTGTTGGTAGTGCATATTACATAGCACCAGAGGTGTTGAAGAGAAGATATGGGCCAGAAGTTGACATATGGAGTATTGGTGTCATGCTATACATTCTTCTTTGTGGTGTCCCTCCCTTTTGGGCAGAATCTGAACATGGTATATTCAATTCCATATTAAGAGGCCACGTTGATTTTACAAGCGATCCATGGCCTTCAATTTCACCTGCAGCAAAAGATCTTGTAAGCAAAATGTTAAATTCAGATCCCAAACAAAGACTTACAGCATATGAAGTTTTGAATCATCCTTGGATCAAGGAGGATGGAGAAGCACCAGATAAACCTATTGACAATGCTGTATTGAATAGGCTCAAACAGTTCAGAGCAATGAACCAATTTAAGAAAGTTGCTCTAAAGGTGATTGCTGGATGCTTATCAGAAGAAGAAATCATGGGATTGAAAGAAATGTTCAAGGGTATGGACACTGACAATAGTGGAACCATTACAATTGAAGAACTCAAACAAGGGCTTGCAAAACAGGGGACAAAGCTTTCAGAACAAGAAGTTAAACAATTAATGGAAGCTGCTGATGCTGATGGAAATGGAACAATAGATTACGATGAGTTCATCACAGCAACAATGCATCTGAACAGAATGAATAGAGAAGAACATCTTTACACTGCTTTCCAATATTTTGATAAAGATAACAGCGGGTTCATTACTACTGAAGAATTAGATCAAGCTCTTCGTGAATACAACATGCATGATGGCAGAGACATCAAGGATATCCTTCAAGAAGTTGATGGAGATAATGATGGACGTATTAACTATGATGAGTTTGCAGCTATGATGAGAAAAGGAAATCCAGAAGCTCATACTAAGAAGAGGCGTGATTCATTTGTTTCACTTTAG 1593 0.3792 MGNCCSQGGDAPAATDNSATAEKGETNEQNTSNDNEPSTNPMTTPPPTSKPPPTTSPSPSTKPSKPAAMGPVLQRPMEDLGRGQFGVTHLCTHKVTKEQFACKTIAKRKLVNKEDIEDVRREVQIMHHLTGQANIVELKGAYEDKQSVHLVMELCAGGELFDRIIAKGHYTERAAASLLRTIVQIVHTLHSMGVIHRDLKPENFLLLNKDENAPLKATDFGLSVFFKQGEMFKDIVGSAYYIAPEVLKRRYGPEVDIWSIGVMLYILLCGVPPFWAESEHGIFNSILRGHVDFTSDPWPSISPAAKDLVSKMLNSDPKQRLTAYEVLNHPWIKEDGEAPDKPIDNAVLNRLKQFRAMNQFKKVALKVIAGCLSEEEIMGLKEMFKGMDTDNSGTITIEELKQGLAKQGTKLSEQEVKQLMEAADADGNGTIDYDEFITATMHLNRMNREEHLYTAFQYFDKDNSGFITTEELDQALREYNMHDGRDIKDILQEVDGDNDGRINYDEFAAMMRKGNPEAHTKKRRDSFVSL 530
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car05g00804 530 Pfam EF-hand domain pair 449 512 IPR002048 GO:0005509
Car05g00804 530 Pfam EF-hand domain pair 380 440 IPR002048 GO:0005509
Car05g00804 530 Gene3D Transferase(Phosphotransferase) domain 1 160 339 - -
Car05g00804 530 ProSitePatterns EF-hand calcium-binding domain. 460 472 IPR018247 -
Car05g00804 530 ProSiteProfiles Protein kinase domain profile. 74 332 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car05g00804 530 ProSitePatterns Protein kinases ATP-binding region signature. 80 107 IPR017441 GO:0005524
Car05g00804 530 MobiDBLite consensus disorder prediction 10 39 - -
Car05g00804 530 PANTHER SERINE/THREONINE-PROTEIN KINASE 32 520 - -
Car05g00804 530 Pfam Protein kinase domain 77 332 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car05g00804 530 ProSitePatterns Serine/Threonine protein kinases active-site signature. 194 206 IPR008271 GO:0004672|GO:0006468
Car05g00804 530 ProSiteProfiles EF-hand calcium-binding domain profile. 375 410 IPR002048 GO:0005509
Car05g00804 530 SUPERFAMILY Protein kinase-like (PK-like) 77 333 IPR011009 -
Car05g00804 530 PANTHER CALMODULIN-DOMAIN KINASE CDPK PROTEIN 32 520 - -
Car05g00804 530 SMART efh_1 451 479 IPR002048 GO:0005509
Car05g00804 530 SMART efh_1 379 407 IPR002048 GO:0005509
Car05g00804 530 SMART efh_1 415 443 IPR002048 GO:0005509
Car05g00804 530 SMART efh_1 486 514 IPR002048 GO:0005509
Car05g00804 530 ProSitePatterns EF-hand calcium-binding domain. 388 400 IPR018247 -
Car05g00804 530 ProSiteProfiles EF-hand calcium-binding domain profile. 486 517 IPR002048 GO:0005509
Car05g00804 530 CDD STKc_CAMK 80 331 - -
Car05g00804 530 ProSiteProfiles EF-hand calcium-binding domain profile. 447 482 IPR002048 GO:0005509
Car05g00804 530 ProSitePatterns EF-hand calcium-binding domain. 495 507 IPR018247 -
Car05g00804 530 Gene3D Phosphorylase Kinase; domain 1 77 159 - -
Car05g00804 530 SUPERFAMILY EF-hand 372 512 IPR011992 -
Car05g00804 530 ProSitePatterns EF-hand calcium-binding domain. 424 436 IPR018247 -
Car05g00804 530 ProSiteProfiles EF-hand calcium-binding domain profile. 411 446 IPR002048 GO:0005509
Car05g00804 530 MobiDBLite consensus disorder prediction 1 71 - -
Car05g00804 530 SMART serkin_6 74 332 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car05g00804 530 Gene3D - 340 518 - -
Car05g00804 530 MobiDBLite consensus disorder prediction 40 60 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car05g00804 Car-Chr5 44386489 44390899 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car05g00804 1 525 EF-hand Containing Proteins AT5G12180 78.879 0.0 868
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CDPK Car05g00804 Pkinase 2.7e-74 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car05g00804 K13412 - gmx:100781355 911.368
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car05g00804 05 44386489 44390899 Car05g00804 05 44386489 44390899 ECH