Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car05g00803 ATGGACTCAAAAACAGTTAGAAGCTATATTCATGTGGCTCTTGTAATATCTTTCCTAACAGCAAATATTGTTTTATCTGATGACAATGTGCCAATTCCTTCTGACAAGGCTCAATTGAATACATGGTTTAATAACAATGTGAAGCCACTTTCTCAAAGAAAGAATACATTGGACCCTGCATTGGTTACTGCAGAGGAAGGTGCTAAGGTTGTTAAGGTCATGAAAGATGGTAGTGGAGATTTCAAAACCATCACTGATGCAATTAAAAGTATCCCTGAAGGGAACACTAAACGTGTGATTGTGTATATTGGAGGTGGAAATTTTAATGAAAAAATTACTATTGGGAGAACAAAACCTTTTGTTACCTTATATGGGGCATTAGGGGGGAACATGCCAAACTTGACTTATGGTGGCACTGCACAACAATATGGAACTGTTGATAGTGCTACATTGATTGTTGAAGGTGATTATTTCGTCGCGGCTAACATCATGATCTCGaATACAGCACCAAGACCTGATGGAAAAAGACAAGGAGCTCAAGCAGTGGCATTGAGAATTTCTGGTGACAAAGCATCATTTTATAATTGCAAGTTATTGGGATTTCAGGATACAGTATGTGATGATAGGAATAGGCATTTGTTCAAAAATTGCTTAATTCAAGGCACTGTGGATTTTATTTTTGGAAGTGGGAAATCACTCTATTTGAACACTGAGTTGAGAGTGCTTGGAGACACTGGAATGACAGTTATAGTGGCACAAGCAAGAAAAAGTGATTCAGAAGACAATGGTTATTCATTTGTGCATTGTGACATTACAGGAACAGGGAATGGGACATTCTTGGGTAGAGCTTGGATGTCTCATTCTAAAGCTGTATTTGCTTACACCCATATGACCAGTGTTGTGAATCAGGAAGGGTGGAGTGACAACAGGCACAGTCAATATGCTAGCACTGTATATTTTGGAGAGTACCGCAACACAGGACCTGGTGCAGATCTAAAAGGTCGTTCCAAAATCACAAAGCAACTAAGTGATGCAGAAGTCAAGCCTTACATAACACTTGCCATGATCGAAGGCTCCAAATGGCTACTTCCTCCTCCAAATCTCAAAGTGtag 1113 0.3935 MDSKTVRSYIHVALVISFLTANIVLSDDNVPIPSDKAQLNTWFNNNVKPLSQRKNTLDPALVTAEEGAKVVKVMKDGSGDFKTITDAIKSIPEGNTKRVIVYIGGGNFNEKITIGRTKPFVTLYGALGGNMPNLTYGGTAQQYGTVDSATLIVEGDYFVAANIMISNTAPRPDGKRQGAQAVALRISGDKASFYNCKLLGFQDTVCDDRNRHLFKNCLIQGTVDFIFGSGKSLYLNTELRVLGDTGMTVIVAQARKSDSEDNGYSFVHCDITGTGNGTFLGRAWMSHSKAVFAYTHMTSVVNQEGWSDNRHSQYASTVYFGEYRNTGPGADLKGRSKITKQLSDAEVKPYITLAMIEGSKWLLPPPNLKV 370
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car05g00803 370 Pfam Pectinesterase 71 358 IPR000070 GO:0030599|GO:0042545
Car05g00803 370 PANTHER PECTINESTERASE 63-RELATED 36 363 - -
Car05g00803 370 ProSitePatterns Pectinesterase signature 2. 219 228 IPR033131 -
Car05g00803 370 Gene3D - 66 365 IPR012334 -
Car05g00803 370 PANTHER ACYL-COA THIOESTER HYDROLASE YBHC-RELATED 36 363 - -
Car05g00803 370 SUPERFAMILY Pectin lyase-like 68 362 IPR011050 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car05g00803 Car-Chr5 44360774 44362741 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car05g00803 10 368 Carbohydrate Esterase AT1G69940 55.989 6.36e-148 421
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car05g00803 K01051 - gmx:100816036 583.178